Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03950

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,432,770	+		MIT1002_03948	0.20	-0.6
4,432,822	+		MIT1002_03948	0.47	+1.6
4,432,822	+		MIT1002_03948	0.47	-0.9
4,432,830	-		MIT1002_03948	0.51	-1.0
4,432,836	-		MIT1002_03948	0.54	-0.9
4,432,856	+		MIT1002_03948	0.65	+0.1
4,432,864	-		MIT1002_03948	0.69	+1.9
4,432,883	+		MIT1002_03948	0.79	+0.1
4,432,890	+		MIT1002_03948	0.82	-0.7
4,432,910	-				-0.4
4,432,927	+				-0.3
4,432,940	+				+1.5
4,432,950	+				-0.1
4,432,950	+				-0.9
4,432,950	+				+0.4
4,432,950	+				+1.7
4,432,950	+				-1.9
4,432,950	+				-1.3
4,432,950	+				+0.8
4,432,950	+				-0.6
4,432,950	+				-1.0
4,432,950	+				-1.4
4,432,950	+				-0.9
4,432,958	-				+1.0
4,432,958	-				-0.8
4,432,958	-				-0.2
4,432,958	-				+1.4
4,432,958	-				-2.5
4,432,958	-				-1.9
4,432,958	-				-2.0
4,432,958	-				+0.8
4,432,958	-				-2.0
4,432,958	-				+0.2
4,432,958	-				-0.0
4,432,958	-				-2.9
4,433,061	+		MIT1002_03949	0.23	-0.7
4,433,066	+		MIT1002_03949	0.24	+1.4
4,433,076	+		MIT1002_03949	0.25	-0.6
4,433,142	+		MIT1002_03949	0.36	+1.4
4,433,142	+		MIT1002_03949	0.36	-1.6
4,433,188	-		MIT1002_03949	0.43	-1.4
4,433,188	-		MIT1002_03949	0.43	+1.0
4,433,269	+		MIT1002_03949	0.56	+1.8
4,433,286	-		MIT1002_03949	0.59	-0.4
4,433,286	-		MIT1002_03949	0.59	+0.2
4,433,286	-		MIT1002_03949	0.59	-2.0
4,433,432	+		MIT1002_03949	0.82	-0.5
4,433,440	-		MIT1002_03949	0.83	-0.0
4,433,440	-		MIT1002_03949	0.83	+0.6
4,433,457	+		MIT1002_03949	0.86	-0.8
4,433,465	+		MIT1002_03949	0.87	-0.2
4,433,465	+		MIT1002_03949	0.87	-0.1
4,433,465	+		MIT1002_03949	0.87	+2.3
4,433,473	-		MIT1002_03949	0.88	-1.4
4,433,563	-				-1.3
4,433,691	+				-0.9
4,433,793	+				+0.7
4,433,836	-		MIT1002_03950	0.23	+2.7
4,433,838	+		MIT1002_03950	0.24	+0.1
4,433,902	+		MIT1002_03950	0.46	-0.8
4,433,902	+		MIT1002_03950	0.46	+0.6
4,433,910	-		MIT1002_03950	0.48	+0.4
4,434,064	+				-1.6
4,434,094	+				-0.5
4,434,107	-				+1.2
4,434,308	+				-0.2
4,434,310	+		MIT1002_03951	0.10	-0.2
4,434,320	+		MIT1002_03951	0.12	-0.3
4,434,431	+		MIT1002_03951	0.29	-1.9
4,434,454	+		MIT1002_03951	0.33	+0.5
4,434,454	-		MIT1002_03951	0.33	+1.4
4,434,462	+		MIT1002_03951	0.34	-0.7
4,434,479	-		MIT1002_03951	0.37	-0.3
4,434,486	-		MIT1002_03951	0.38	-1.3
4,434,494	-		MIT1002_03951	0.39	-0.6
4,434,562	+		MIT1002_03951	0.50	-0.4
4,434,562	+		MIT1002_03951	0.50	-0.2
4,434,570	-		MIT1002_03951	0.51	+0.2
4,434,584	-		MIT1002_03951	0.53	-0.8
4,434,777	+		MIT1002_03951	0.83	+0.4
4,434,777	-		MIT1002_03951	0.83	-0.0
4,434,806	+		MIT1002_03951	0.88	+0.3
4,434,841	+				+0.7
4,434,922	-				+0.9
4,434,939	-				-2.3