Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03776

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,219,916	-				-0.4
4,220,065	+		MIT1002_03775	0.16	+0.9
4,220,076	-		MIT1002_03775	0.17	-1.6
4,220,124	+		MIT1002_03775	0.22	+0.9
4,220,124	+		MIT1002_03775	0.22	-1.4
4,220,124	+		MIT1002_03775	0.22	+0.6
4,220,124	+		MIT1002_03775	0.22	-0.6
4,220,132	-		MIT1002_03775	0.23	-2.3
4,220,132	-		MIT1002_03775	0.23	-2.9
4,220,132	-		MIT1002_03775	0.23	+0.3
4,220,145	-		MIT1002_03775	0.24	+0.3
4,220,190	-		MIT1002_03775	0.29	-0.1
4,220,190	-		MIT1002_03775	0.29	+1.4
4,220,203	-		MIT1002_03775	0.30	-1.2
4,220,252	-		MIT1002_03775	0.35	-0.4
4,220,290	+		MIT1002_03775	0.38	+2.6
4,220,290	+		MIT1002_03775	0.38	+0.3
4,220,405	-		MIT1002_03775	0.50	+1.5
4,220,469	-		MIT1002_03775	0.56	+0.8
4,220,537	+		MIT1002_03775	0.63	-0.0
4,220,575	+		MIT1002_03775	0.66	-0.4
4,220,575	+		MIT1002_03775	0.66	+1.1
4,220,575	+		MIT1002_03775	0.66	+2.3
4,220,577	+		MIT1002_03775	0.67	-0.5
4,220,583	-		MIT1002_03775	0.67	-0.8
4,220,583	-		MIT1002_03775	0.67	+3.3
4,220,583	-		MIT1002_03775	0.67	-0.4
4,220,583	-		MIT1002_03775	0.67	-0.7
4,220,632	+		MIT1002_03775	0.72	-0.6
4,220,707	-		MIT1002_03775	0.79	+1.9
4,220,719	+		MIT1002_03775	0.81	-2.8
4,220,719	+		MIT1002_03775	0.81	-1.9
4,220,727	-		MIT1002_03775	0.81	-1.5
4,220,776	-		MIT1002_03775	0.86	+0.1
4,220,878	-				-0.1
4,220,880	-				+0.2
4,220,914	+				+0.3
4,220,919	+				-0.5
4,220,919	+				-1.7
4,220,919	+				+1.2
4,220,972	+				+0.5
4,221,079	-		MIT1002_03776	0.17	+0.4
4,221,231	-		MIT1002_03776	0.32	-0.7
4,221,251	-		MIT1002_03776	0.34	+0.4
4,221,310	+		MIT1002_03776	0.40	-1.4
4,221,330	+		MIT1002_03776	0.42	-2.6
4,221,330	+		MIT1002_03776	0.42	-0.1
4,221,465	+		MIT1002_03776	0.56	+0.6
4,221,473	-		MIT1002_03776	0.56	+0.8
4,221,493	-		MIT1002_03776	0.58	-1.6
4,221,530	+		MIT1002_03776	0.62	-2.0
4,221,530	+		MIT1002_03776	0.62	-1.1
4,221,563	+		MIT1002_03776	0.66	-3.1
4,221,635	+		MIT1002_03776	0.73	+0.1
4,221,652	+		MIT1002_03776	0.75	-2.2
4,221,660	-		MIT1002_03776	0.75	-0.4
4,221,800	-		MIT1002_03776	0.89	+0.2
4,221,801	+		MIT1002_03776	0.90	+0.1
4,221,802	+		MIT1002_03776	0.90	+0.8
4,221,855	+				-1.5
4,221,863	-				+2.1
4,221,863	-				-0.2
4,221,889	+				+1.9
4,221,897	+				+1.4
4,221,909	-				-0.3
4,222,010	+				+0.1
4,222,020	+				+0.3
4,222,085	+				-0.4
4,222,093	-				+0.8
4,222,128	-				-0.1
4,222,183	+				-0.0
4,222,235	-		MIT1002_03777	0.11	+1.6
4,222,236	-		MIT1002_03777	0.11	-0.5
4,222,241	-		MIT1002_03777	0.12	+0.5
4,222,401	-		MIT1002_03777	0.33	+1.6
4,222,418	+		MIT1002_03777	0.35	+0.6
4,222,469	+		MIT1002_03777	0.42	-2.2
4,222,477	-		MIT1002_03777	0.43	-1.9
4,222,581	-		MIT1002_03777	0.57	-0.9
4,222,604	-		MIT1002_03777	0.60	+0.3
4,222,604	-		MIT1002_03777	0.60	+1.1
4,222,616	-		MIT1002_03777	0.61	-0.6
4,222,625	-		MIT1002_03777	0.63	+0.1
4,222,687	+		MIT1002_03777	0.71	+0.8
4,222,729	-		MIT1002_03777	0.76	+0.8
4,222,764	+		MIT1002_03777	0.81	+0.3
4,222,764	+		MIT1002_03777	0.81	-0.2
4,222,820	+		MIT1002_03777	0.89	-0.4
4,222,848	+				+0.8