Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03756

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,196,459	-		MIT1002_03755	0.40	-1.7
4,196,460	-		MIT1002_03755	0.40	-0.2
4,196,477	+		MIT1002_03755	0.41	+0.2
4,196,600	+		MIT1002_03755	0.51	-0.6
4,196,608	-		MIT1002_03755	0.51	+0.0
4,196,615	+		MIT1002_03755	0.52	-1.8
4,196,632	+		MIT1002_03755	0.53	-0.2
4,196,637	+		MIT1002_03755	0.54	+1.1
4,196,647	-		MIT1002_03755	0.54	+1.3
4,196,668	-		MIT1002_03755	0.56	-1.9
4,196,671	-		MIT1002_03755	0.56	-1.6
4,196,692	-		MIT1002_03755	0.58	+3.8
4,196,692	-		MIT1002_03755	0.58	+0.2
4,196,726	-		MIT1002_03755	0.61	-0.4
4,196,741	-		MIT1002_03755	0.62	-0.3
4,196,807	+		MIT1002_03755	0.67	-1.0
4,196,812	+		MIT1002_03755	0.67	-1.4
4,196,820	-		MIT1002_03755	0.68	+1.0
4,196,830	-		MIT1002_03755	0.69	-1.2
4,196,830	-		MIT1002_03755	0.69	-0.0
4,196,840	-		MIT1002_03755	0.70	-0.4
4,196,884	-		MIT1002_03755	0.73	-1.3
4,196,900	-		MIT1002_03755	0.74	+0.5
4,196,966	+		MIT1002_03755	0.80	+0.5
4,196,985	-		MIT1002_03755	0.81	+0.9
4,197,083	-		MIT1002_03755	0.89	-1.4
4,197,098	-		MIT1002_03755	0.90	+0.1
4,197,144	+				-2.1
4,197,221	+				-0.5
4,197,229	-				-2.9
4,197,254	+				-1.4
4,197,267	+				+0.2
4,197,267	+				+1.1
4,197,275	-				+1.9
4,197,275	-				-1.4
4,197,398	-				+0.1
4,197,483	-				+1.1
4,197,542	+				-0.6
4,197,610	+				+0.6
4,197,756	+		MIT1002_03756	0.15	+0.1
4,197,761	+		MIT1002_03756	0.16	+0.8
4,197,761	+		MIT1002_03756	0.16	+0.5
4,197,776	+		MIT1002_03756	0.17	-1.0
4,197,776	+		MIT1002_03756	0.17	+0.4
4,197,784	-		MIT1002_03756	0.17	+0.1
4,197,784	-		MIT1002_03756	0.17	+0.1
4,197,792	-		MIT1002_03756	0.17	+1.8
4,197,835	+		MIT1002_03756	0.20	+2.7
4,197,887	+		MIT1002_03756	0.22	-0.8
4,197,905	+		MIT1002_03756	0.23	+2.6
4,197,920	-		MIT1002_03756	0.24	+0.3
4,197,922	+		MIT1002_03756	0.24	-2.3
4,197,940	-		MIT1002_03756	0.25	+1.1
4,198,013	+		MIT1002_03756	0.29	+1.2
4,198,013	+		MIT1002_03756	0.29	+1.6
4,198,013	+		MIT1002_03756	0.29	-0.4
4,198,014	-		MIT1002_03756	0.29	+1.8
4,198,021	-		MIT1002_03756	0.29	-0.1
4,198,026	+		MIT1002_03756	0.29	+0.9
4,198,026	+		MIT1002_03756	0.29	+0.3
4,198,045	-		MIT1002_03756	0.30	+0.4
4,198,143	+		MIT1002_03756	0.35	+0.5
4,198,143	+		MIT1002_03756	0.35	-0.1
4,198,151	-		MIT1002_03756	0.36	+0.7
4,198,151	-		MIT1002_03756	0.36	-0.7
4,198,151	-		MIT1002_03756	0.36	+0.3
4,198,151	-		MIT1002_03756	0.36	-0.2
4,198,166	-		MIT1002_03756	0.37	+1.9
4,198,227	-		MIT1002_03756	0.40	-0.7
4,198,235	+		MIT1002_03756	0.40	+0.2
4,198,243	-		MIT1002_03756	0.40	+1.7
4,198,245	+		MIT1002_03756	0.41	-0.5
4,198,245	+		MIT1002_03756	0.41	+0.4
4,198,245	+		MIT1002_03756	0.41	+0.7
4,198,253	-		MIT1002_03756	0.41	+0.3
4,198,292	+		MIT1002_03756	0.43	-0.9
4,198,292	+		MIT1002_03756	0.43	+0.5
4,198,304	+		MIT1002_03756	0.44	+0.9
4,198,304	+		MIT1002_03756	0.44	+0.1
4,198,310	-		MIT1002_03756	0.44	+0.3
4,198,335	+		MIT1002_03756	0.45	+1.8
4,198,381	-		MIT1002_03756	0.48	+0.5
4,198,397	-		MIT1002_03756	0.48	-1.0
4,198,417	+		MIT1002_03756	0.49	-1.3
4,198,425	+		MIT1002_03756	0.50	-0.9
4,198,431	+		MIT1002_03756	0.50	+0.5
4,198,449	-		MIT1002_03756	0.51	-0.3
4,198,451	-		MIT1002_03756	0.51	+0.8
4,198,497	+		MIT1002_03756	0.53	+0.4
4,198,497	+		MIT1002_03756	0.53	+0.3
4,198,505	-		MIT1002_03756	0.54	+0.9
4,198,505	-		MIT1002_03756	0.54	+2.1
4,198,505	-		MIT1002_03756	0.54	+0.6
4,198,604	-		MIT1002_03756	0.59	-0.9
4,198,608	+		MIT1002_03756	0.59	-1.2
4,198,616	-		MIT1002_03756	0.60	+1.2
4,198,616	-		MIT1002_03756	0.60	+1.2
4,198,653	-		MIT1002_03756	0.61	+1.1
4,198,721	-		MIT1002_03756	0.65	+0.5
4,198,828	-		MIT1002_03756	0.70	+1.4
4,198,864	-		MIT1002_03756	0.72	+0.9
4,198,901	-		MIT1002_03756	0.74	+1.0
4,198,960	-		MIT1002_03756	0.77	+2.1
4,198,981	-		MIT1002_03756	0.78	+2.2
4,199,020	+		MIT1002_03756	0.80	+0.9
4,199,067	+		MIT1002_03756	0.83	+0.9
4,199,072	+		MIT1002_03756	0.83	+0.9
4,199,080	-		MIT1002_03756	0.83	+0.8
4,199,080	-		MIT1002_03756	0.83	+0.4
4,199,225	+				-0.6
4,199,225	+				+1.1
4,199,225	+				-0.2
4,199,233	-				+1.3
4,199,233	-				+1.0
4,199,262	+				+0.2
4,199,262	+				-1.4
4,199,262	+				-0.8
4,199,262	+				+0.7
4,199,262	+				-0.5
4,199,270	-				+0.4
4,199,270	-				+1.4
4,199,270	-				+0.2
4,199,270	-				+0.1
4,199,270	-				+0.9
4,199,364	+				+0.0
4,199,364	-				+0.2
4,199,372	-				+0.6
4,199,372	-				+0.7
4,199,613	+				+1.9
4,199,613	+				-0.9
4,199,613	+				+0.8
4,199,621	-				+0.5
4,199,696	+				-0.4
4,199,696	+				-1.2
4,199,696	+				+1.5
4,199,696	+				-2.0
4,199,696	+				-1.2
4,199,696	+				+0.0
4,199,696	+				+0.6
4,199,696	+				-0.7
4,199,704	-				-1.5
4,199,704	-				-1.5
4,199,789	-		MIT1002_03757	0.21	-0.9
4,199,890	+		MIT1002_03757	0.65	-0.2
4,199,890	+		MIT1002_03757	0.65	+1.2
4,199,891	-		MIT1002_03757	0.65	-0.5
4,199,898	-		MIT1002_03757	0.68	-3.1
4,199,898	-		MIT1002_03757	0.68	-0.1
4,199,947	+				+0.0
4,199,955	-				-0.5