Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03667

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,099,344	-				-0.3
4,099,432	-				-3.0
4,099,432	-				-1.1
4,099,434	-				+1.7
4,099,441	+				+0.8
4,099,446	+				-0.1
4,099,542	-				-0.8
4,099,596	+				+0.6
4,099,601	+				-0.9
4,099,601	+				-0.5
4,100,069	+				-2.5
4,100,069	+				+0.2
4,100,101	+				+1.3
4,100,114	-				-0.5
4,100,134	-				-0.5
4,100,139	-				-0.9
4,100,261	+		MIT1002_03667	0.13	+0.7
4,100,391	-		MIT1002_03667	0.40	+0.5
4,100,391	-		MIT1002_03667	0.40	+1.2
4,100,402	+		MIT1002_03667	0.42	-0.1
4,100,413	+		MIT1002_03667	0.44	+1.8
4,100,413	+		MIT1002_03667	0.44	-0.1
4,100,413	+		MIT1002_03667	0.44	+0.9
4,100,421	-		MIT1002_03667	0.46	+0.4
4,100,421	-		MIT1002_03667	0.46	+1.4
4,100,475	-		MIT1002_03667	0.57	+0.6
4,100,477	+		MIT1002_03667	0.57	+0.2
4,100,509	+		MIT1002_03667	0.64	-0.0
4,100,509	+		MIT1002_03667	0.64	-0.6
4,100,509	+		MIT1002_03667	0.64	+1.0
4,100,514	+		MIT1002_03667	0.65	+0.6
4,100,517	-		MIT1002_03667	0.66	-0.8
4,100,522	-		MIT1002_03667	0.67	+1.1
4,100,590	+		MIT1002_03667	0.81	-0.1
4,100,600	-		MIT1002_03667	0.83	+1.1
4,100,655	-				-3.5
4,100,757	+				+1.5
4,100,757	+				-0.5
4,100,762	+				+0.4
4,100,765	-				-1.7
4,100,765	-				-2.2
4,100,788	-				-1.0
4,100,806	+				+0.1
4,100,806	+				+0.4
4,100,806	+				-1.9
4,100,814	-				-1.5
4,100,814	-				-0.1
4,100,814	-				+0.3
4,100,826	-				-1.6
4,100,836	-				+0.6
4,100,836	-				-1.0
4,100,836	-				-2.6
4,100,934	-				-2.1
4,100,935	+				+0.4
4,100,943	-				-2.2
4,100,965	+				-2.0
4,100,965	+				+1.5
4,100,965	+				+2.0
4,100,965	+				-0.2
4,100,965	+				+1.3
4,100,973	-				-0.9
4,100,973	-				-3.9
4,100,973	-				-1.2
4,100,973	-				-1.0
4,101,006	+				+0.3
4,101,006	+				-0.2
4,101,041	+				-0.6
4,101,093	+				-0.1
4,101,235	-				-2.1
4,101,263	+				-0.8
4,101,315	-				-2.0
4,101,357	+		MIT1002_03668	0.13	-2.1
4,101,500	-		MIT1002_03668	0.25	-3.2
4,101,532	+		MIT1002_03668	0.28	-2.1
4,101,534	+		MIT1002_03668	0.28	-1.2
4,101,583	+		MIT1002_03668	0.32	-2.5
4,101,677	+		MIT1002_03668	0.39	+0.6