Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03620

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,045,976	+		MIT1002_03619	0.73	-0.6
4,045,984	-		MIT1002_03619	0.73	-1.0
4,045,998	+		MIT1002_03619	0.73	-0.6
4,045,999	+		MIT1002_03619	0.73	+1.3
4,046,005	+		MIT1002_03619	0.74	+0.8
4,046,005	-		MIT1002_03619	0.74	+0.6
4,046,005	-		MIT1002_03619	0.74	+0.0
4,046,006	-		MIT1002_03619	0.74	+0.7
4,046,006	-		MIT1002_03619	0.74	+1.0
4,046,007	-		MIT1002_03619	0.74	-0.6
4,046,013	-		MIT1002_03619	0.74	-0.7
4,046,019	+		MIT1002_03619	0.74	-0.9
4,046,027	-		MIT1002_03619	0.74	+1.3
4,046,036	-		MIT1002_03619	0.75	+0.1
4,046,081	-		MIT1002_03619	0.76	+2.6
4,046,106	+		MIT1002_03619	0.77	+1.6
4,046,106	-		MIT1002_03619	0.77	+0.6
4,046,154	-		MIT1002_03619	0.79	+0.5
4,046,192	-		MIT1002_03619	0.80	-1.0
4,046,206	-		MIT1002_03619	0.81	+0.7
4,046,249	+		MIT1002_03619	0.83	+1.3
4,046,257	+		MIT1002_03619	0.83	+0.4
4,046,277	-		MIT1002_03619	0.84	-1.3
4,046,277	-		MIT1002_03619	0.84	+0.1
4,046,319	+		MIT1002_03619	0.85	+0.6
4,046,334	-		MIT1002_03619	0.86	-1.6
4,046,339	-		MIT1002_03619	0.86	+0.7
4,046,354	+		MIT1002_03619	0.86	-0.0
4,046,367	-		MIT1002_03619	0.87	-0.2
4,046,387	+		MIT1002_03619	0.88	-0.3
4,046,390	-		MIT1002_03619	0.88	+0.7
4,046,400	-		MIT1002_03619	0.88	+0.9
4,046,513	-				-1.5
4,046,637	+				-0.2
4,046,662	-				-0.3
4,046,680	-				+1.2
4,046,705	-				-1.0
4,046,774	+				-0.3
4,046,774	-				-0.6
4,046,782	-				+0.6
4,046,788	+				+1.3
4,046,846	+				+1.0
4,047,014	+		MIT1002_03620	0.11	+0.8
4,047,019	+		MIT1002_03620	0.12	-1.4
4,047,095	+		MIT1002_03620	0.26	-0.8
4,047,129	+		MIT1002_03620	0.32	+1.0
4,047,129	+		MIT1002_03620	0.32	+2.0
4,047,129	+		MIT1002_03620	0.32	+0.9
4,047,168	+		MIT1002_03620	0.39	+1.0
4,047,261	+		MIT1002_03620	0.56	+0.9
4,047,337	+		MIT1002_03620	0.69	+1.6
4,047,384	+		MIT1002_03620	0.78	+1.1
4,047,384	+		MIT1002_03620	0.78	-0.4
4,047,384	+		MIT1002_03620	0.78	+0.3
4,047,384	+		MIT1002_03620	0.78	+1.3
4,047,384	+		MIT1002_03620	0.78	+0.9
4,047,392	-		MIT1002_03620	0.79	-0.9
4,047,392	-		MIT1002_03620	0.79	-1.4
4,047,392	-		MIT1002_03620	0.79	+2.9
4,047,392	-		MIT1002_03620	0.79	-1.0
4,047,392	-		MIT1002_03620	0.79	-2.4
4,047,418	+		MIT1002_03620	0.84	+1.5
4,047,441	+		MIT1002_03620	0.88	-2.2
4,047,449	-		MIT1002_03620	0.89	-1.9
4,047,452	+		MIT1002_03620	0.90	+0.2
4,047,485	-				-1.1
4,047,485	-				-1.8
4,047,568	-				-1.6
4,047,620	+				-3.6
4,047,694	+		MIT1002_03621	0.13	-2.0
4,047,694	+		MIT1002_03621	0.13	-1.0
4,047,694	+		MIT1002_03621	0.13	-1.4
4,047,694	+		MIT1002_03621	0.13	-0.4
4,047,697	-		MIT1002_03621	0.13	-2.0
4,047,702	-		MIT1002_03621	0.13	-2.8
4,047,702	-		MIT1002_03621	0.13	-1.4
4,047,788	-		MIT1002_03621	0.20	-2.5
4,047,806	+		MIT1002_03621	0.21	-1.0
4,047,806	+		MIT1002_03621	0.21	-2.5
4,047,814	-		MIT1002_03621	0.21	-1.8
4,047,814	-		MIT1002_03621	0.21	-2.1
4,047,873	-		MIT1002_03621	0.26	-1.0
4,047,907	-		MIT1002_03621	0.28	-1.0
4,047,911	+		MIT1002_03621	0.28	+0.6
4,047,982	-		MIT1002_03621	0.34	+0.6
4,047,983	+		MIT1002_03621	0.34	-2.5
4,047,983	+		MIT1002_03621	0.34	-2.9
4,047,991	-		MIT1002_03621	0.34	-2.3
4,047,991	-		MIT1002_03621	0.34	+0.8
4,048,006	+		MIT1002_03621	0.35	-2.8
4,048,235	+		MIT1002_03621	0.52	-0.7
4,048,235	+		MIT1002_03621	0.52	-3.2
4,048,244	+		MIT1002_03621	0.53	-2.1
4,048,283	+		MIT1002_03621	0.56	+0.3
4,048,283	+		MIT1002_03621	0.56	-2.1
4,048,285	+		MIT1002_03621	0.56	-1.5
4,048,423	-		MIT1002_03621	0.66	-1.8
4,048,424	+		MIT1002_03621	0.66	+0.6
4,048,442	-		MIT1002_03621	0.67	-2.0
4,048,455	-		MIT1002_03621	0.68	-0.4
4,048,483	-		MIT1002_03621	0.70	-3.5
4,048,491	+		MIT1002_03621	0.71	-1.7
4,048,503	+		MIT1002_03621	0.72	-2.5
4,048,506	-		MIT1002_03621	0.72	-3.4