Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03603

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
4,022,499	-		MIT1002_03602	0.59	-0.2
4,022,504	-		MIT1002_03602	0.60	+0.1
4,022,540	+		MIT1002_03602	0.61	+0.6
4,022,578	+		MIT1002_03602	0.63	-0.6
4,022,578	+		MIT1002_03602	0.63	-0.6
4,022,650	-		MIT1002_03602	0.66	+0.3
4,022,650	-		MIT1002_03602	0.66	-1.5
4,022,673	+		MIT1002_03602	0.68	+0.4
4,022,695	+		MIT1002_03602	0.69	-1.5
4,022,749	-		MIT1002_03602	0.71	-0.8
4,022,754	-		MIT1002_03602	0.71	-0.5
4,022,793	+		MIT1002_03602	0.73	-0.3
4,022,793	+		MIT1002_03602	0.73	+0.6
4,022,795	+		MIT1002_03602	0.73	-0.1
4,022,944	+		MIT1002_03602	0.80	+0.6
4,022,960	+		MIT1002_03602	0.81	-0.1
4,022,967	+		MIT1002_03602	0.81	-0.7
4,022,968	-		MIT1002_03602	0.82	-0.2
4,022,968	-		MIT1002_03602	0.82	-0.2
4,022,989	+		MIT1002_03602	0.83	-0.8
4,023,106	+		MIT1002_03602	0.88	-0.0
4,023,124	+		MIT1002_03602	0.89	-1.2
4,023,132	+		MIT1002_03602	0.89	+0.1
4,023,132	+		MIT1002_03602	0.89	-1.1
4,023,135	-		MIT1002_03602	0.89	-0.2
4,023,146	+		MIT1002_03602	0.90	+0.2
4,023,148	-				+0.5
4,023,154	-				-2.6
4,023,422	-				-1.7
4,023,569	+				-0.7
4,023,577	-				-2.4
4,023,577	-				-0.2
4,023,584	+				+0.6
4,023,587	+				-0.4
4,023,593	+				+1.7
4,023,636	+		MIT1002_03603	0.10	+0.5
4,023,644	-		MIT1002_03603	0.11	-1.0
4,023,653	-		MIT1002_03603	0.12	-0.6
4,023,695	+		MIT1002_03603	0.15	-0.8
4,023,700	+		MIT1002_03603	0.15	-1.4
4,023,744	+		MIT1002_03603	0.18	+0.2
4,023,796	-		MIT1002_03603	0.22	-0.2
4,023,802	-		MIT1002_03603	0.22	+1.6
4,023,807	-		MIT1002_03603	0.23	+0.8
4,023,851	+		MIT1002_03603	0.26	+0.3
4,023,859	+		MIT1002_03603	0.26	-0.6
4,023,859	+		MIT1002_03603	0.26	+0.1
4,023,869	+		MIT1002_03603	0.27	-2.7
4,023,869	+		MIT1002_03603	0.27	-0.5
4,023,869	+		MIT1002_03603	0.27	+0.7
4,023,869	+		MIT1002_03603	0.27	-0.2
4,023,869	+		MIT1002_03603	0.27	-2.3
4,023,869	+		MIT1002_03603	0.27	-1.4
4,023,869	+		MIT1002_03603	0.27	-0.7
4,023,869	+		MIT1002_03603	0.27	-0.9
4,023,869	+		MIT1002_03603	0.27	+0.1
4,023,877	-		MIT1002_03603	0.28	-0.1
4,023,877	-		MIT1002_03603	0.28	+1.1
4,023,877	-		MIT1002_03603	0.28	-0.6
4,023,877	-		MIT1002_03603	0.28	-0.6
4,023,877	-		MIT1002_03603	0.28	+0.7
4,023,877	-		MIT1002_03603	0.28	-1.1
4,023,889	-		MIT1002_03603	0.29	+0.2
4,023,979	-		MIT1002_03603	0.35	-0.2
4,024,018	+		MIT1002_03603	0.38	-0.0
4,024,020	+		MIT1002_03603	0.38	+2.2
4,024,023	-		MIT1002_03603	0.38	+0.6
4,024,054	-		MIT1002_03603	0.40	+0.4
4,024,133	+		MIT1002_03603	0.46	-0.6
4,024,133	+		MIT1002_03603	0.46	-0.3
4,024,135	+		MIT1002_03603	0.46	+0.8
4,024,135	+		MIT1002_03603	0.46	-0.9
4,024,135	+		MIT1002_03603	0.46	-0.0
4,024,141	-		MIT1002_03603	0.47	+0.3
4,024,293	+		MIT1002_03603	0.58	-0.8
4,024,317	-		MIT1002_03603	0.59	-1.0
4,024,317	-		MIT1002_03603	0.59	+0.6
4,024,351	+		MIT1002_03603	0.62	-0.2
4,024,475	+		MIT1002_03603	0.71	+0.2
4,024,483	-		MIT1002_03603	0.71	+0.1
4,024,596	+		MIT1002_03603	0.79	-0.1
4,024,654	-		MIT1002_03603	0.83	+0.5
4,024,688	-		MIT1002_03603	0.86	-0.3
4,024,688	-		MIT1002_03603	0.86	+1.1
4,024,710	+		MIT1002_03603	0.87	-0.5
4,024,744	-		MIT1002_03603	0.90	-1.4
4,024,800	+				-0.7
4,024,807	+				-0.1
4,024,838	+				+0.2
4,024,838	+				+0.3
4,024,846	-				+0.4
4,024,846	-				-0.8
4,024,896	+				-1.6
4,024,918	+				+0.0
4,024,936	-				-1.1
4,024,947	+				-1.4
4,024,947	+				+1.0
4,024,947	+				+0.3
4,024,947	+				+0.9
4,024,947	+				-0.7
4,024,955	-				+0.4
4,024,955	-				-0.5
4,024,955	-				-0.5
4,024,955	-				-0.9
4,024,957	+				-0.1
4,024,965	-				-1.8
4,024,965	-				+0.6
4,024,973	+				-0.1
4,024,978	+				-1.0
4,024,981	-				+0.6
4,025,017	+				-2.0
4,025,025	-				+0.6
4,025,064	+				+0.2
4,025,102	-				+0.3
4,025,163	+				-0.6
4,025,163	+				+0.6
4,025,163	+				+0.4
4,025,163	+				+0.8
4,025,171	-				-0.4
4,025,171	-				-1.4
4,025,171	-				-2.5
4,025,171	-				-1.8
4,025,171	-				-0.6
4,025,171	-				+0.5
4,025,175	+				-0.1
4,025,175	+				+0.9
4,025,175	+				+0.5
4,025,175	+				+0.6
4,025,175	+				+0.0
4,025,175	+				+0.5
4,025,183	-				+0.8
4,025,183	-				+0.4
4,025,183	-				-0.7
4,025,183	-				+0.0
4,025,183	-				+0.9
4,025,183	-				+1.2
4,025,183	-				-0.1
4,025,183	-				-1.0
4,025,183	-				+0.6
4,025,183	-				-2.0
4,025,183	-				-1.1
4,025,318	+				-0.4
4,025,369	+		MIT1002_03604	0.10	-1.3
4,025,369	+		MIT1002_03604	0.10	-0.3
4,025,377	-		MIT1002_03604	0.11	+1.8
4,025,379	+		MIT1002_03604	0.11	-0.1
4,025,386	-		MIT1002_03604	0.11	-3.9
4,025,387	+		MIT1002_03604	0.11	-0.5
4,025,387	+		MIT1002_03604	0.11	-0.5
4,025,411	+		MIT1002_03604	0.13	-1.0
4,025,419	-		MIT1002_03604	0.13	-1.6
4,025,445	-		MIT1002_03604	0.15	-0.7
4,025,445	-		MIT1002_03604	0.15	-1.7
4,025,507	+		MIT1002_03604	0.19	+0.2
4,025,507	+		MIT1002_03604	0.19	-1.0
4,025,507	+		MIT1002_03604	0.19	-0.2
4,025,515	-		MIT1002_03604	0.19	-1.1
4,025,542	+		MIT1002_03604	0.21	-0.1
4,025,554	+		MIT1002_03604	0.21	+0.6
4,025,593	-		MIT1002_03604	0.24	-0.4
4,025,593	-		MIT1002_03604	0.24	-0.3
4,025,599	+		MIT1002_03604	0.24	+0.2
4,025,599	+		MIT1002_03604	0.24	-0.3
4,025,625	+		MIT1002_03604	0.26	+0.1
4,025,625	+		MIT1002_03604	0.26	-0.4
4,025,625	+		MIT1002_03604	0.26	-1.3
4,025,625	+		MIT1002_03604	0.26	-2.4
4,025,679	+		MIT1002_03604	0.29	+1.0
4,025,692	+		MIT1002_03604	0.30	-0.4
4,025,699	-		MIT1002_03604	0.30	+0.3
4,025,700	-		MIT1002_03604	0.30	+0.7
4,025,716	+		MIT1002_03604	0.31	-1.5
4,025,716	+		MIT1002_03604	0.31	-1.0
4,025,745	-		MIT1002_03604	0.33	-0.3
4,025,774	+		MIT1002_03604	0.35	+0.1
4,025,783	+		MIT1002_03604	0.35	-0.2
4,025,786	-		MIT1002_03604	0.35	-0.2
4,025,791	-		MIT1002_03604	0.36	+0.6
4,025,796	-		MIT1002_03604	0.36	+0.7