Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03524

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,939,982	-		MIT1002_03523	0.17	+0.8
3,940,035	+		MIT1002_03523	0.24	+2.6
3,940,043	-		MIT1002_03523	0.25	+3.7
3,940,045	+		MIT1002_03523	0.25	-1.1
3,940,051	-		MIT1002_03523	0.26	+0.1
3,940,051	-		MIT1002_03523	0.26	-0.9
3,940,051	-		MIT1002_03523	0.26	+0.8
3,940,105	+		MIT1002_03523	0.32	-1.5
3,940,110	+		MIT1002_03523	0.33	-1.0
3,940,110	+		MIT1002_03523	0.33	+0.3
3,940,110	+		MIT1002_03523	0.33	-1.3
3,940,113	-		MIT1002_03523	0.33	+0.1
3,940,118	-		MIT1002_03523	0.34	+1.3
3,940,118	-		MIT1002_03523	0.34	-1.7
3,940,118	-		MIT1002_03523	0.34	-1.0
3,940,174	-		MIT1002_03523	0.40	-2.5
3,940,187	-		MIT1002_03523	0.42	-2.3
3,940,209	-		MIT1002_03523	0.44	+0.2
3,940,233	+		MIT1002_03523	0.47	+1.6
3,940,233	+		MIT1002_03523	0.47	+0.2
3,940,330	+		MIT1002_03523	0.59	-0.0
3,940,408	+		MIT1002_03523	0.68	-1.8
3,940,408	+		MIT1002_03523	0.68	-0.3
3,940,416	-		MIT1002_03523	0.69	+1.5
3,940,439	-		MIT1002_03523	0.72	-0.4
3,940,465	+		MIT1002_03523	0.75	+0.6
3,940,511	-		MIT1002_03523	0.80	-0.9
3,940,644	+				+1.1
3,940,652	-				+0.6
3,940,724	+				+1.0
3,940,724	+				-1.3
3,940,739	-				+0.5
3,940,739	-				+0.3
3,940,752	+				+0.0
3,940,752	+				+0.8
3,940,770	-				+1.7
3,940,770	-				-0.3
3,940,822	+				-0.4
3,940,828	-				-0.1
3,940,864	-				+0.3
3,940,935	-				+0.1
3,941,039	-				-0.7
3,941,069	-				-1.4
3,941,166	-		MIT1002_03524	0.13	+0.9
3,941,188	+		MIT1002_03524	0.14	-2.0
3,941,189	-		MIT1002_03524	0.14	+1.0
3,941,211	-		MIT1002_03524	0.14	+1.0
3,941,211	-		MIT1002_03524	0.14	+0.2
3,941,241	-		MIT1002_03524	0.15	-1.0
3,941,258	+		MIT1002_03524	0.16	-0.6
3,941,278	+		MIT1002_03524	0.17	+0.3
3,941,319	+		MIT1002_03524	0.18	+0.6
3,941,319	+		MIT1002_03524	0.18	+1.0
3,941,332	-		MIT1002_03524	0.18	-0.4
3,941,335	+		MIT1002_03524	0.18	+1.2
3,941,506	-		MIT1002_03524	0.24	-0.4
3,941,529	-		MIT1002_03524	0.25	-0.3
3,941,529	-		MIT1002_03524	0.25	-0.3
3,941,535	+		MIT1002_03524	0.25	-0.3
3,941,574	-		MIT1002_03524	0.26	+1.1
3,941,574	-		MIT1002_03524	0.26	-0.0
3,941,681	+		MIT1002_03524	0.29	-0.1
3,941,686	+		MIT1002_03524	0.29	+0.9
3,941,686	+		MIT1002_03524	0.29	-2.0
3,941,687	+		MIT1002_03524	0.30	-0.0
3,941,700	-		MIT1002_03524	0.30	-0.4
3,941,700	-		MIT1002_03524	0.30	-0.4
3,941,751	-		MIT1002_03524	0.32	-2.3
3,941,759	+		MIT1002_03524	0.32	-1.2
3,941,812	+		MIT1002_03524	0.33	-0.0
3,941,888	-		MIT1002_03524	0.36	+2.7
3,941,927	-		MIT1002_03524	0.37	-0.2
3,941,946	+		MIT1002_03524	0.38	+0.8
3,942,100	-		MIT1002_03524	0.43	+0.4
3,942,102	+		MIT1002_03524	0.43	+0.2
3,942,118	+		MIT1002_03524	0.43	-1.0
3,942,136	-		MIT1002_03524	0.44	-0.4
3,942,150	+		MIT1002_03524	0.44	-0.5
3,942,156	+		MIT1002_03524	0.44	+1.2
3,942,156	+		MIT1002_03524	0.44	-0.0
3,942,156	+		MIT1002_03524	0.44	+0.8
3,942,156	+		MIT1002_03524	0.44	-3.3
3,942,183	-		MIT1002_03524	0.45	+0.2
3,942,238	-		MIT1002_03524	0.47	+0.8
3,942,257	+		MIT1002_03524	0.48	+0.1
3,942,298	+		MIT1002_03524	0.49	+0.3
3,942,338	+		MIT1002_03524	0.50	+0.1
3,942,338	+		MIT1002_03524	0.50	+1.4
3,942,338	+		MIT1002_03524	0.50	+2.4
3,942,338	+		MIT1002_03524	0.50	+0.0
3,942,346	-		MIT1002_03524	0.50	-0.6
3,942,346	-		MIT1002_03524	0.50	+0.7
3,942,346	-		MIT1002_03524	0.50	+1.7
3,942,346	-		MIT1002_03524	0.50	-2.1
3,942,356	-		MIT1002_03524	0.51	+0.3
3,942,382	+		MIT1002_03524	0.52	+0.1
3,942,423	-		MIT1002_03524	0.53	+0.2
3,942,493	-		MIT1002_03524	0.55	+0.8
3,942,493	-		MIT1002_03524	0.55	-0.4
3,942,493	-		MIT1002_03524	0.55	+3.5
3,942,495	+		MIT1002_03524	0.55	-0.9
3,942,503	-		MIT1002_03524	0.55	-1.2
3,942,503	-		MIT1002_03524	0.55	-1.7
3,942,504	-		MIT1002_03524	0.55	-0.9
3,942,561	-		MIT1002_03524	0.57	-0.4
3,942,574	-		MIT1002_03524	0.58	+1.6
3,942,574	-		MIT1002_03524	0.58	-1.7
3,942,643	+		MIT1002_03524	0.60	+1.1
3,942,651	-		MIT1002_03524	0.60	+1.2
3,942,651	-		MIT1002_03524	0.60	-0.0
3,942,651	-		MIT1002_03524	0.60	+0.9
3,942,651	-		MIT1002_03524	0.60	+0.4
3,942,761	+		MIT1002_03524	0.64	-0.9
3,942,830	+		MIT1002_03524	0.66	-0.2
3,942,918	+		MIT1002_03524	0.68	+0.4
3,942,929	+		MIT1002_03524	0.69	-2.7
3,943,129	-		MIT1002_03524	0.75	+0.2
3,943,129	-		MIT1002_03524	0.75	+0.9
3,943,156	-		MIT1002_03524	0.76	+0.8
3,943,216	+		MIT1002_03524	0.78	+0.9
3,943,259	-		MIT1002_03524	0.79	-2.0
3,943,329	+		MIT1002_03524	0.81	+1.4
3,943,341	+		MIT1002_03524	0.82	-1.8
3,943,416	+		MIT1002_03524	0.84	-0.8
3,943,544	+		MIT1002_03524	0.88	+1.2
3,943,552	-		MIT1002_03524	0.89	+1.1
3,943,557	-		MIT1002_03524	0.89	+1.1
3,943,557	-		MIT1002_03524	0.89	+1.1
3,943,557	-		MIT1002_03524	0.89	+0.5
3,943,643	-				-1.1
3,943,657	+				-0.4
3,943,670	+				+0.2
3,943,691	+				-0.3
3,943,693	-				-0.4
3,943,711	+				+1.3
3,943,714	-				-0.8
3,943,729	+				+0.4
3,943,729	+				-1.1
3,943,737	-				+2.4
3,943,737	-				+1.8
3,943,795	+				-0.0
3,943,889	+				-0.5
3,943,935	+				+1.3
3,943,935	+				+2.1
3,943,957	+				-1.8
3,943,965	-				-1.0
3,944,076	+		MIT1002_03525	0.25	+1.7
3,944,099	-		MIT1002_03525	0.28	-1.1
3,944,140	+		MIT1002_03525	0.34	+0.1
3,944,140	+		MIT1002_03525	0.34	+0.8
3,944,140	+		MIT1002_03525	0.34	+1.9
3,944,216	+		MIT1002_03525	0.45	+0.8
3,944,241	-		MIT1002_03525	0.49	+0.4
3,944,264	+		MIT1002_03525	0.52	+1.6
3,944,278	+		MIT1002_03525	0.54	+0.6
3,944,311	-		MIT1002_03525	0.59	-0.6
3,944,361	+		MIT1002_03525	0.66	-0.8
3,944,379	-		MIT1002_03525	0.69	+0.8
3,944,393	+		MIT1002_03525	0.71	+0.2
3,944,458	+		MIT1002_03525	0.80	+2.0
3,944,460	-		MIT1002_03525	0.80	-0.6
3,944,461	-		MIT1002_03525	0.80	+0.5
3,944,466	-		MIT1002_03525	0.81	-0.1
3,944,473	+		MIT1002_03525	0.82	+0.6
3,944,473	+		MIT1002_03525	0.82	+1.1
3,944,481	-		MIT1002_03525	0.83	+0.2
3,944,481	-		MIT1002_03525	0.83	-0.0
3,944,481	-		MIT1002_03525	0.83	-0.2
3,944,481	-		MIT1002_03525	0.83	+0.6
3,944,513	+		MIT1002_03525	0.88	-0.5
3,944,513	+		MIT1002_03525	0.88	+0.8
3,944,513	+		MIT1002_03525	0.88	+0.3
3,944,521	-		MIT1002_03525	0.89	+1.1
3,944,521	-		MIT1002_03525	0.89	+0.3
3,944,521	-		MIT1002_03525	0.89	+0.6
3,944,610	-				-0.7
3,944,615	-				-0.5
3,944,615	-				-0.8
3,944,621	+				+0.5
3,944,654	+				+1.7
3,944,662	-		MIT1002_03526	0.11	-1.1
3,944,713	+		MIT1002_03526	0.19	+1.3
3,944,721	+		MIT1002_03526	0.20	-0.6
3,944,729	-		MIT1002_03526	0.22	+0.5
3,944,729	-		MIT1002_03526	0.22	+0.5
3,944,853	+		MIT1002_03526	0.41	+0.9