Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03429

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,830,905	-		MIT1002_03427	0.47	+0.5
3,830,958	-		MIT1002_03427	0.54	+0.5
3,830,979	+		MIT1002_03427	0.57	-0.0
3,831,057	+		MIT1002_03427	0.67	-0.6
3,831,119	-		MIT1002_03427	0.76	+0.2
3,831,142	+		MIT1002_03427	0.79	-0.1
3,831,165	+		MIT1002_03427	0.82	-1.3
3,831,187	-		MIT1002_03427	0.85	-0.7
3,831,208	+		MIT1002_03427	0.88	+0.7
3,831,208	+		MIT1002_03427	0.88	-1.4
3,831,216	-		MIT1002_03427	0.89	+4.3
3,831,216	-		MIT1002_03427	0.89	-1.3
3,831,222	+				+1.2
3,831,230	-				-0.2
3,831,246	+				+0.5
3,831,264	-				+0.8
3,831,294	+				+0.5
3,831,381	+		MIT1002_03428	0.25	-0.4
3,831,389	-		MIT1002_03428	0.27	+0.7
3,831,427	+		MIT1002_03428	0.37	-0.1
3,831,492	-		MIT1002_03428	0.53	+0.6
3,831,500	-		MIT1002_03428	0.55	+1.0
3,831,500	-		MIT1002_03428	0.55	+1.0
3,831,526	-		MIT1002_03428	0.62	-2.1
3,831,662	-				+0.3
3,831,707	+				+0.4
3,831,707	+				-2.0
3,831,715	-				-3.5
3,831,766	+				+0.1
3,831,843	+				+0.9
3,831,848	+				+0.5
3,831,848	+				-1.1
3,831,848	+				+0.9
3,831,849	-				-0.9
3,831,851	-				+0.7
3,831,866	-				+1.4
3,831,873	-				-0.9
3,831,882	+				+1.2
3,831,900	-				-1.7
3,831,940	+				-2.1
3,831,940	+				-0.1
3,831,940	+				+0.2
3,832,045	-		MIT1002_03429	0.26	+0.1
3,832,098	+		MIT1002_03429	0.36	+0.5
3,832,098	+		MIT1002_03429	0.36	-1.0
3,832,133	+		MIT1002_03429	0.42	+1.1
3,832,138	+		MIT1002_03429	0.43	+0.1
3,832,143	+		MIT1002_03429	0.44	+0.3
3,832,143	+		MIT1002_03429	0.44	+0.5
3,832,143	+		MIT1002_03429	0.44	+0.4
3,832,143	+		MIT1002_03429	0.44	-0.8
3,832,143	+		MIT1002_03429	0.44	+1.4
3,832,143	+		MIT1002_03429	0.44	-0.5
3,832,143	+		MIT1002_03429	0.44	+0.3
3,832,143	+		MIT1002_03429	0.44	-0.8
3,832,143	+		MIT1002_03429	0.44	+0.1
3,832,143	+		MIT1002_03429	0.44	-0.6
3,832,143	+		MIT1002_03429	0.44	+0.5
3,832,143	+		MIT1002_03429	0.44	-2.1
3,832,143	+		MIT1002_03429	0.44	+0.2
3,832,143	+		MIT1002_03429	0.44	-1.4
3,832,143	+		MIT1002_03429	0.44	-0.1
3,832,143	+		MIT1002_03429	0.44	-0.6
3,832,143	+		MIT1002_03429	0.44	-0.8
3,832,143	+		MIT1002_03429	0.44	+0.3
3,832,143	+		MIT1002_03429	0.44	-0.2
3,832,143	+		MIT1002_03429	0.44	-2.5
3,832,146	-		MIT1002_03429	0.45	+2.0
3,832,151	-		MIT1002_03429	0.46	-0.1
3,832,151	-		MIT1002_03429	0.46	-1.1
3,832,151	-		MIT1002_03429	0.46	+0.5
3,832,151	-		MIT1002_03429	0.46	-2.8
3,832,151	-		MIT1002_03429	0.46	+2.2
3,832,151	-		MIT1002_03429	0.46	-1.4
3,832,151	-		MIT1002_03429	0.46	+0.7
3,832,151	-		MIT1002_03429	0.46	-0.6
3,832,151	-		MIT1002_03429	0.46	-0.6
3,832,151	-		MIT1002_03429	0.46	-0.2
3,832,151	-		MIT1002_03429	0.46	+0.5
3,832,151	-		MIT1002_03429	0.46	-1.7
3,832,151	-		MIT1002_03429	0.46	-0.8
3,832,151	-		MIT1002_03429	0.46	-0.5
3,832,151	-		MIT1002_03429	0.46	-2.9
3,832,151	-		MIT1002_03429	0.46	+0.5
3,832,151	-		MIT1002_03429	0.46	+1.1
3,832,151	-		MIT1002_03429	0.46	+0.2
3,832,151	-		MIT1002_03429	0.46	+0.2
3,832,151	-		MIT1002_03429	0.46	-0.2
3,832,151	-		MIT1002_03429	0.46	-1.1
3,832,151	-		MIT1002_03429	0.46	-0.4
3,832,151	-		MIT1002_03429	0.46	-0.9
3,832,151	-		MIT1002_03429	0.46	+0.2
3,832,151	-		MIT1002_03429	0.46	+1.1
3,832,153	+		MIT1002_03429	0.46	-0.1
3,832,153	+		MIT1002_03429	0.46	-0.1
3,832,153	+		MIT1002_03429	0.46	+1.7
3,832,153	+		MIT1002_03429	0.46	+2.2
3,832,161	-		MIT1002_03429	0.47	+0.6
3,832,161	-		MIT1002_03429	0.47	-0.6
3,832,161	-		MIT1002_03429	0.47	-0.1
3,832,161	-		MIT1002_03429	0.47	-0.3
3,832,172	+		MIT1002_03429	0.49	-0.4
3,832,184	+		MIT1002_03429	0.52	+1.9
3,832,192	-		MIT1002_03429	0.53	-1.2
3,832,194	-		MIT1002_03429	0.53	-1.1
3,832,267	+		MIT1002_03429	0.67	-0.1
3,832,278	+		MIT1002_03429	0.69	+0.5
3,832,286	-		MIT1002_03429	0.70	-2.8
3,832,286	-		MIT1002_03429	0.70	-0.8
3,832,286	-		MIT1002_03429	0.70	-1.0
3,832,320	-		MIT1002_03429	0.77	-1.8
3,832,374	+		MIT1002_03429	0.86	-2.0
3,832,413	-				-0.5
3,832,422	+				+1.4
3,832,422	+				+0.8
3,832,430	-				-0.1
3,832,486	+				+0.0
3,832,585	+				-0.2
3,832,701	-		MIT1002_03430	0.14	+0.2
3,832,715	+		MIT1002_03430	0.15	+0.1
3,832,723	-		MIT1002_03430	0.16	-0.5
3,832,780	-		MIT1002_03430	0.21	-0.1
3,832,861	+		MIT1002_03430	0.28	+1.9
3,832,871	+		MIT1002_03430	0.29	+0.1
3,832,929	+		MIT1002_03430	0.34	-2.1
3,832,929	+		MIT1002_03430	0.34	+0.7
3,832,974	-		MIT1002_03430	0.38	+0.9
3,833,015	-		MIT1002_03430	0.42	-0.5
3,833,048	+		MIT1002_03430	0.44	+0.5
3,833,075	-		MIT1002_03430	0.47	+0.1
3,833,115	+		MIT1002_03430	0.50	+1.5
3,833,201	-		MIT1002_03430	0.58	+0.1
3,833,232	+		MIT1002_03430	0.61	-2.2
3,833,253	-		MIT1002_03430	0.63	-1.1
3,833,395	+		MIT1002_03430	0.75	-1.3
3,833,437	+		MIT1002_03430	0.79	+1.2
3,833,447	-		MIT1002_03430	0.80	-0.5