Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03309

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,693,070	+		MIT1002_03308	0.70	+0.1
3,693,072	+		MIT1002_03308	0.70	+0.3
3,693,072	+		MIT1002_03308	0.70	-0.5
3,693,090	-		MIT1002_03308	0.71	-0.8
3,693,095	+		MIT1002_03308	0.71	-1.5
3,693,134	-		MIT1002_03308	0.73	+0.8
3,693,153	+		MIT1002_03308	0.73	+1.0
3,693,163	+		MIT1002_03308	0.74	+1.1
3,693,163	+		MIT1002_03308	0.74	-0.5
3,693,163	+		MIT1002_03308	0.74	-0.7
3,693,163	+		MIT1002_03308	0.74	+0.1
3,693,240	+		MIT1002_03308	0.77	+0.1
3,693,240	+		MIT1002_03308	0.77	-0.1
3,693,248	-		MIT1002_03308	0.77	-0.0
3,693,248	-		MIT1002_03308	0.77	+0.5
3,693,248	-		MIT1002_03308	0.77	-1.2
3,693,250	+		MIT1002_03308	0.77	-0.3
3,693,342	-		MIT1002_03308	0.80	-0.2
3,693,394	-		MIT1002_03308	0.82	-1.5
3,693,395	-		MIT1002_03308	0.82	+1.3
3,693,521	-		MIT1002_03308	0.87	-0.5
3,693,542	-		MIT1002_03308	0.88	-0.9
3,693,554	-		MIT1002_03308	0.88	-0.7
3,693,710	-				-0.8
3,693,732	+				-0.1
3,693,732	+				+0.3
3,693,732	+				-0.8
3,693,740	-				+2.5
3,693,835	+				+0.0
3,693,871	-				+0.0
3,693,987	-				+0.6
3,694,007	+				-1.9
3,694,030	+				-0.2
3,694,094	+		MIT1002_03309	0.11	-1.7
3,694,095	-		MIT1002_03309	0.11	-1.5
3,694,102	+		MIT1002_03309	0.12	-0.7
3,694,110	-		MIT1002_03309	0.13	-1.1
3,694,110	-		MIT1002_03309	0.13	+0.7
3,694,110	-		MIT1002_03309	0.13	+0.1
3,694,110	-		MIT1002_03309	0.13	-0.5
3,694,153	-		MIT1002_03309	0.19	-0.4
3,694,158	-		MIT1002_03309	0.19	+0.1
3,694,200	+		MIT1002_03309	0.24	+0.1
3,694,200	+		MIT1002_03309	0.24	-0.7
3,694,218	-		MIT1002_03309	0.27	-1.0
3,694,250	+		MIT1002_03309	0.31	-1.9
3,694,299	+		MIT1002_03309	0.37	+1.5
3,694,307	-		MIT1002_03309	0.38	+1.3
3,694,307	-		MIT1002_03309	0.38	+0.2
3,694,319	+		MIT1002_03309	0.40	+0.1
3,694,320	+		MIT1002_03309	0.40	-1.0
3,694,327	+		MIT1002_03309	0.41	+0.1
3,694,373	+		MIT1002_03309	0.46	-0.7
3,694,375	+		MIT1002_03309	0.47	+0.5
3,694,383	-		MIT1002_03309	0.48	-0.4
3,694,404	+		MIT1002_03309	0.50	+0.4
3,694,484	-		MIT1002_03309	0.60	+0.3
3,694,676	+		MIT1002_03309	0.85	-1.9
3,694,676	+		MIT1002_03309	0.85	-0.1
3,694,676	+		MIT1002_03309	0.85	+0.2
3,694,684	-		MIT1002_03309	0.86	-2.3
3,694,684	-		MIT1002_03309	0.86	+0.6
3,694,684	-		MIT1002_03309	0.86	-1.2
3,694,696	+		MIT1002_03309	0.87	-0.8
3,694,702	+		MIT1002_03309	0.88	-0.6
3,694,704	-		MIT1002_03309	0.88	-0.5
3,694,725	+				+0.1
3,694,764	+				+1.0
3,694,777	+				-0.6
3,694,777	+				-0.7
3,694,798	-				-0.1
3,694,800	+				+0.6
3,694,800	+				-0.2
3,694,808	-				-0.1
3,694,808	-				+0.2
3,694,820	-				-0.5
3,694,829	-				+0.8
3,694,878	-				+0.7
3,694,964	-		MIT1002_03310	0.17	-0.0
3,695,061	-		MIT1002_03310	0.48	-0.9
3,695,080	+		MIT1002_03310	0.54	+0.3
3,695,088	-		MIT1002_03310	0.56	-0.1
3,695,088	-		MIT1002_03310	0.56	-0.0
3,695,146	+		MIT1002_03310	0.75	-0.1
3,695,180	+		MIT1002_03310	0.85	+0.5
3,695,258	+				-2.2
3,695,273	+				-0.9
3,695,312	-				-2.3
3,695,320	+				-0.3
3,695,320	+				-0.3
3,695,328	-		MIT1002_03311	0.12	-0.6
3,695,351	+		MIT1002_03311	0.27	-0.6
3,695,359	-		MIT1002_03311	0.33	-0.2
3,695,359	-		MIT1002_03311	0.33	-0.4
3,695,415	-		MIT1002_03311	0.71	+1.5
3,695,460	-				+0.5
3,695,667	+				-2.6
3,695,669	+				-0.1
3,695,675	-				-0.2
3,695,713	+		MIT1002_03312	0.13	+0.9