Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03283

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,657,317	-				-0.0
3,657,351	-				+1.7
3,657,364	-				+0.6
3,657,377	+				+0.4
3,657,377	+				+0.8
3,657,389	+				+0.1
3,657,400	+				+0.1
3,657,408	-				+0.6
3,657,427	+				+0.2
3,657,431	-				+1.4
3,657,468	-		MIT1002_03282	0.12	+0.7
3,657,484	-		MIT1002_03282	0.14	+1.5
3,657,484	-		MIT1002_03282	0.14	+0.7
3,657,494	-		MIT1002_03282	0.15	+1.7
3,657,508	-		MIT1002_03282	0.17	+1.8
3,657,529	-		MIT1002_03282	0.19	+0.5
3,657,538	+		MIT1002_03282	0.20	+0.5
3,657,538	+		MIT1002_03282	0.20	+1.3
3,657,546	-		MIT1002_03282	0.20	+1.6
3,657,546	-		MIT1002_03282	0.20	-0.4
3,657,546	-		MIT1002_03282	0.20	+0.8
3,657,551	-		MIT1002_03282	0.21	+2.7
3,657,558	-		MIT1002_03282	0.22	+0.5
3,657,596	+		MIT1002_03282	0.26	+1.0
3,657,601	+		MIT1002_03282	0.26	+1.0
3,657,604	-		MIT1002_03282	0.26	+0.3
3,657,624	+		MIT1002_03282	0.28	+1.2
3,657,652	+		MIT1002_03282	0.31	+2.7
3,657,738	-		MIT1002_03282	0.40	+0.2
3,657,771	-		MIT1002_03282	0.43	+0.9
3,657,829	-		MIT1002_03282	0.49	+1.3
3,657,837	-		MIT1002_03282	0.50	+0.6
3,657,891	+		MIT1002_03282	0.56	+1.5
3,657,899	-		MIT1002_03282	0.57	+0.8
3,657,906	+		MIT1002_03282	0.57	+0.6
3,657,998	+		MIT1002_03282	0.67	+1.1
3,658,004	-		MIT1002_03282	0.67	+0.8
3,658,035	+		MIT1002_03282	0.70	-0.1
3,658,042	-		MIT1002_03282	0.71	+0.3
3,658,043	-		MIT1002_03282	0.71	-0.7
3,658,043	-		MIT1002_03282	0.71	-0.2
3,658,057	-		MIT1002_03282	0.73	+0.3
3,658,072	+		MIT1002_03282	0.74	-0.3
3,658,074	-		MIT1002_03282	0.74	+0.3
3,658,080	-		MIT1002_03282	0.75	+1.7
3,658,095	-		MIT1002_03282	0.77	+0.6
3,658,112	-		MIT1002_03282	0.78	+1.4
3,658,116	+		MIT1002_03282	0.79	-0.2
3,658,116	+		MIT1002_03282	0.79	+0.5
3,658,123	+		MIT1002_03282	0.79	+0.3
3,658,228	-				-1.2
3,658,287	+				+1.5
3,658,287	+				+2.9
3,658,293	+				+0.7
3,658,293	+				+0.4
3,658,293	+				-0.7
3,658,295	-				+0.6
3,658,301	-				-0.3
3,658,344	-				+1.1
3,658,370	-				-0.0
3,658,372	+				+0.4
3,658,372	+				-0.0
3,658,380	-				+0.4
3,658,380	-				+1.4
3,658,380	-				+0.4
3,658,384	+				-0.3
3,658,483	+		MIT1002_03283	0.23	-0.5
3,658,488	+		MIT1002_03283	0.24	+0.6
3,658,498	+		MIT1002_03283	0.25	-0.2
3,658,498	+		MIT1002_03283	0.25	-0.1
3,658,498	+		MIT1002_03283	0.25	+0.0
3,658,498	+		MIT1002_03283	0.25	+1.5
3,658,498	+		MIT1002_03283	0.25	+1.1
3,658,498	+		MIT1002_03283	0.25	+0.6
3,658,498	+		MIT1002_03283	0.25	+0.8
3,658,498	+		MIT1002_03283	0.25	-1.3
3,658,498	+		MIT1002_03283	0.25	-0.1
3,658,498	+		MIT1002_03283	0.25	+1.9
3,658,498	+		MIT1002_03283	0.25	-2.8
3,658,498	+		MIT1002_03283	0.25	+1.9
3,658,498	+		MIT1002_03283	0.25	+0.7
3,658,498	+		MIT1002_03283	0.25	-0.6
3,658,498	+		MIT1002_03283	0.25	+1.4
3,658,506	-		MIT1002_03283	0.27	-0.7
3,658,506	-		MIT1002_03283	0.27	+2.2
3,658,506	-		MIT1002_03283	0.27	+0.5
3,658,506	-		MIT1002_03283	0.27	+1.4
3,658,506	-		MIT1002_03283	0.27	+1.4
3,658,506	-		MIT1002_03283	0.27	+0.5
3,658,506	-		MIT1002_03283	0.27	+0.3
3,658,506	-		MIT1002_03283	0.27	+0.1
3,658,516	-		MIT1002_03283	0.28	+0.4
3,658,603	+		MIT1002_03283	0.40	+0.2
3,658,633	+		MIT1002_03283	0.44	+0.6
3,658,634	-		MIT1002_03283	0.44	+0.4
3,658,651	+		MIT1002_03283	0.47	+0.1
3,658,659	-		MIT1002_03283	0.48	+0.2
3,658,721	+		MIT1002_03283	0.56	-0.7
3,658,915	+		MIT1002_03283	0.83	-0.5
3,658,941	+		MIT1002_03283	0.87	+1.8
3,659,077	+				-0.2
3,659,095	+				+0.9
3,659,104	+				-0.8
3,659,104	-				+0.9
3,659,112	-				+1.0
3,659,131	+		MIT1002_03284	0.12	+1.5
3,659,219	+		MIT1002_03284	0.23	+0.1
3,659,288	+		MIT1002_03284	0.32	-0.1
3,659,288	+		MIT1002_03284	0.32	+0.8
3,659,296	-		MIT1002_03284	0.33	+0.8
3,659,331	+		MIT1002_03284	0.38	-0.1
3,659,383	+		MIT1002_03284	0.44	-1.2
3,659,388	+		MIT1002_03284	0.45	+0.6
3,659,388	+		MIT1002_03284	0.45	+5.2
3,659,391	-		MIT1002_03284	0.45	+0.3
3,659,441	-		MIT1002_03284	0.52	+0.7
3,659,465	-		MIT1002_03284	0.55	+0.4
3,659,609	-		MIT1002_03284	0.73	+0.8
3,659,609	-		MIT1002_03284	0.73	-0.5
3,659,642	-		MIT1002_03284	0.77	+0.2
3,659,668	+		MIT1002_03284	0.81	+0.6
3,659,740	+				+1.5
3,659,939	-				+0.7
3,659,949	+				+0.1
3,660,020	+		MIT1002_03285	0.11	-1.7
3,660,020	+		MIT1002_03285	0.11	+0.8
3,660,020	+		MIT1002_03285	0.11	+0.3
3,660,028	-		MIT1002_03285	0.11	+0.5
3,660,028	-		MIT1002_03285	0.11	-1.1
3,660,028	-		MIT1002_03285	0.11	-0.1
3,660,028	-		MIT1002_03285	0.11	+0.7