Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03225

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,595,476	+				-1.4
3,595,539	+		MIT1002_03225	0.30	+0.6
3,595,539	+		MIT1002_03225	0.30	-0.6
3,595,547	-		MIT1002_03225	0.33	+1.5
3,595,547	-		MIT1002_03225	0.33	+0.4
3,595,547	-		MIT1002_03225	0.33	-0.1
3,595,547	-		MIT1002_03225	0.33	-0.6
3,595,549	+		MIT1002_03225	0.33	+0.8
3,595,566	-		MIT1002_03225	0.39	+1.5
3,595,577	+		MIT1002_03225	0.42	+1.4
3,595,585	-		MIT1002_03225	0.45	-0.1
3,595,643	-		MIT1002_03225	0.64	+0.3
3,595,645	+		MIT1002_03225	0.64	+0.9
3,595,645	+		MIT1002_03225	0.64	+0.3
3,595,645	+		MIT1002_03225	0.64	+0.1
3,595,653	-		MIT1002_03225	0.67	+1.3
3,595,660	+		MIT1002_03225	0.69	-0.3
3,595,667	+		MIT1002_03225	0.72	-0.9
3,595,668	-		MIT1002_03225	0.72	-1.0
3,595,678	-		MIT1002_03225	0.75	-2.2
3,595,938	+				+0.4
3,596,051	+				-0.1
3,596,051	+				-2.0
3,596,059	-				+1.6
3,596,063	+				-1.9
3,596,122	-				-0.3
3,596,141	+				-2.9
3,596,173	-				+0.1
3,596,189	+				-0.5
3,596,197	-				+0.9
3,596,197	-				-0.8
3,596,244	+				+1.0
3,596,333	+				+0.4
3,596,371	+				+1.0
3,596,371	+				+1.0
3,596,379	-				+1.6
3,596,613	-		MIT1002_03226	0.15	-0.5