Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03167

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,529,027	+		MIT1002_03166	0.29	-3.1
3,529,035	-		MIT1002_03166	0.30	+0.0
3,529,035	-		MIT1002_03166	0.30	-0.6
3,529,064	+		MIT1002_03166	0.34	+1.4
3,529,064	+		MIT1002_03166	0.34	+2.1
3,529,095	+		MIT1002_03166	0.38	+0.7
3,529,098	-		MIT1002_03166	0.38	-0.5
3,529,098	-		MIT1002_03166	0.38	+0.3
3,529,258	+		MIT1002_03166	0.58	+0.2
3,529,312	-		MIT1002_03166	0.65	-0.6
3,529,330	+		MIT1002_03166	0.68	+0.2
3,529,331	-		MIT1002_03166	0.68	+0.3
3,529,353	+		MIT1002_03166	0.71	+0.4
3,529,361	-		MIT1002_03166	0.72	-0.1
3,529,395	+		MIT1002_03166	0.76	+0.4
3,529,413	+		MIT1002_03166	0.78	+0.9
3,529,421	-		MIT1002_03166	0.79	+0.6
3,529,465	-		MIT1002_03166	0.85	+1.0
3,529,531	+				+1.4
3,529,534	+				-0.9
3,529,536	+				+2.4
3,529,544	-				+1.2
3,529,544	-				+0.2
3,529,544	-				-0.9
3,529,544	-				+0.4
3,529,544	-				+1.1
3,529,548	+				-0.6
3,529,618	-				-2.0
3,529,666	-				-0.4
3,529,676	-				+0.3
3,529,733	+				-0.4
3,529,734	-				+0.5
3,529,736	-				-0.3
3,529,741	-				-0.4
3,529,741	-				-1.3
3,529,741	-				-0.8
3,529,754	+				+0.1
3,529,772	+				+1.1
3,529,782	+				+1.8
3,529,791	-				-0.3
3,529,981	+				-0.0
3,530,062	+				+0.6
3,530,083	+		MIT1002_03167	0.11	-0.9
3,530,103	-		MIT1002_03167	0.12	-0.6
3,530,162	-		MIT1002_03167	0.17	+0.7
3,530,196	-		MIT1002_03167	0.19	+1.1
3,530,299	+		MIT1002_03167	0.26	-0.5
3,530,317	-		MIT1002_03167	0.28	-1.6
3,530,363	+		MIT1002_03167	0.31	+2.0
3,530,401	-		MIT1002_03167	0.34	+1.3
3,530,410	-		MIT1002_03167	0.35	-0.5
3,530,444	-		MIT1002_03167	0.37	+1.0
3,530,496	-		MIT1002_03167	0.41	+0.4
3,530,504	-		MIT1002_03167	0.41	-0.7
3,530,511	-		MIT1002_03167	0.42	-1.6
3,530,546	+		MIT1002_03167	0.44	-0.2
3,530,578	-		MIT1002_03167	0.47	+1.1
3,530,613	+		MIT1002_03167	0.49	-2.6
3,530,620	-		MIT1002_03167	0.50	+0.1
3,530,628	-		MIT1002_03167	0.50	+0.4
3,530,660	-		MIT1002_03167	0.53	+0.2
3,530,683	+		MIT1002_03167	0.54	-0.1
3,530,683	+		MIT1002_03167	0.54	-0.2
3,530,683	+		MIT1002_03167	0.54	-0.1
3,530,690	-		MIT1002_03167	0.55	+0.1
3,530,691	-		MIT1002_03167	0.55	+1.9
3,530,691	-		MIT1002_03167	0.55	-0.5
3,530,710	+		MIT1002_03167	0.56	-2.2
3,530,718	-		MIT1002_03167	0.57	-0.1
3,530,724	+		MIT1002_03167	0.57	-0.1
3,530,724	+		MIT1002_03167	0.57	+0.3
3,530,732	-		MIT1002_03167	0.58	-1.1
3,530,732	-		MIT1002_03167	0.58	+0.4
3,530,733	+		MIT1002_03167	0.58	-2.0
3,530,757	-		MIT1002_03167	0.60	-0.6
3,530,848	-		MIT1002_03167	0.66	+0.2
3,531,027	-		MIT1002_03167	0.79	-0.6
3,531,119	-		MIT1002_03167	0.86	+0.2
3,531,124	+		MIT1002_03167	0.87	+1.4
3,531,174	+				-0.5
3,531,174	+				-2.4
3,531,180	+				-0.3
3,531,180	+				-2.0
3,531,182	-				+0.9
3,531,188	-				+0.3
3,531,216	-				-0.1
3,531,230	+				-1.8
3,531,263	+				+1.0
3,531,263	+				+0.3
3,531,280	-				+1.2
3,531,282	+				-0.5
3,531,439	+				-3.0
3,531,455	-				+0.7
3,531,457	-				+1.9
3,531,550	+		MIT1002_03168	0.26	+1.7
3,531,550	+		MIT1002_03168	0.26	+0.7
3,531,551	-		MIT1002_03168	0.26	-0.4
3,531,558	-		MIT1002_03168	0.28	+0.0
3,531,558	-		MIT1002_03168	0.28	-0.3
3,531,580	+		MIT1002_03168	0.35	+1.1
3,531,671	+		MIT1002_03168	0.62	+1.4
3,531,779	-				+0.2
3,531,809	-				-1.2
3,532,018	+				+2.6
3,532,018	+				+0.5
3,532,073	+		MIT1002_03169	0.18	+0.6
3,532,149	+		MIT1002_03169	0.35	+0.4
3,532,183	+		MIT1002_03169	0.43	+0.0
3,532,183	+		MIT1002_03169	0.43	-0.3
3,532,191	-		MIT1002_03169	0.44	+0.1
3,532,191	-		MIT1002_03169	0.44	+0.3