Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03087

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,439,912	-		MIT1002_03086	0.79	-8.6
3,439,912	-		MIT1002_03086	0.79	-4.0
3,439,965	+		MIT1002_03086	0.81	-4.0
3,439,973	-		MIT1002_03086	0.81	+0.1
3,439,975	+		MIT1002_03086	0.81	-4.0
3,440,054	+		MIT1002_03086	0.85	-2.3
3,440,062	-		MIT1002_03086	0.85	-2.4
3,440,098	-		MIT1002_03086	0.86	-3.3
3,440,098	-		MIT1002_03086	0.86	-2.9
3,440,098	-		MIT1002_03086	0.86	-5.7
3,440,105	+		MIT1002_03086	0.87	-1.1
3,440,113	-		MIT1002_03086	0.87	-0.3
3,440,134	+		MIT1002_03086	0.88	-0.1
3,440,146	+		MIT1002_03086	0.88	-0.5
3,440,174	+		MIT1002_03086	0.89	+0.1
3,440,310	+				-3.1
3,440,318	-				-3.7
3,440,318	-				-2.3
3,440,441	+				-2.1
3,440,441	+				-2.2
3,440,446	+				-3.8
3,440,496	-				+1.2
3,440,510	-				-2.1
3,440,566	+				-4.0
3,440,590	-				-3.2
3,440,664	+				-1.9
3,440,750	+				-0.2
3,440,758	-				-0.5
3,440,820	+				+0.0
3,440,850	-				-2.0
3,440,852	+				+0.3
3,440,872	+				-0.0
3,440,872	+				+1.0
3,440,880	-				+0.5
3,440,880	-				+0.2
3,440,880	-				+0.1
3,440,880	-				-0.9
3,440,885	-				-1.3
3,440,885	-				+0.0
3,440,893	+				-1.1
3,440,902	-				+0.5
3,440,904	+				+1.9
3,440,908	+				-1.1
3,440,914	-				-0.3
3,440,916	-				-0.4
3,440,965	-				-2.2
3,440,977	-				+0.5
3,440,984	-				+0.5
3,440,984	-				-0.0
3,441,020	-				+1.6
3,441,036	+				+0.2
3,441,046	-				+0.8
3,441,102	+		MIT1002_03087	0.11	-2.5
3,441,110	-		MIT1002_03087	0.12	-0.7
3,441,128	-		MIT1002_03087	0.12	+1.1
3,441,172	+		MIT1002_03087	0.14	-0.5
3,441,172	+		MIT1002_03087	0.14	+1.9
3,441,187	+		MIT1002_03087	0.15	-2.6
3,441,200	-		MIT1002_03087	0.15	-2.5
3,441,337	-		MIT1002_03087	0.21	+0.9
3,441,346	-		MIT1002_03087	0.21	+0.6
3,441,353	-		MIT1002_03087	0.21	+0.1
3,441,398	+		MIT1002_03087	0.23	+0.5
3,441,403	+		MIT1002_03087	0.23	-1.3
3,441,457	+		MIT1002_03087	0.25	-1.6
3,441,547	+		MIT1002_03087	0.29	-1.0
3,441,555	-		MIT1002_03087	0.29	-0.3
3,441,583	+		MIT1002_03087	0.30	+1.0
3,441,588	-		MIT1002_03087	0.30	+0.5
3,441,728	+		MIT1002_03087	0.36	-0.3
3,441,749	+		MIT1002_03087	0.37	-0.3
3,441,757	-		MIT1002_03087	0.37	+0.2
3,441,757	-		MIT1002_03087	0.37	-1.6
3,441,802	+		MIT1002_03087	0.39	-0.2
3,441,830	+		MIT1002_03087	0.40	-0.4
3,441,830	+		MIT1002_03087	0.40	-0.5
3,441,838	-		MIT1002_03087	0.40	-0.7
3,441,920	-		MIT1002_03087	0.43	+1.5
3,441,931	+		MIT1002_03087	0.44	+0.2
3,441,939	-		MIT1002_03087	0.44	-0.5
3,441,940	-		MIT1002_03087	0.44	-0.9
3,441,953	+		MIT1002_03087	0.45	+0.4
3,441,955	-		MIT1002_03087	0.45	-1.4
3,442,023	+		MIT1002_03087	0.47	-0.1
3,442,088	-		MIT1002_03087	0.50	-1.0
3,442,089	-		MIT1002_03087	0.50	+0.9
3,442,094	-		MIT1002_03087	0.50	-0.3
3,442,136	-		MIT1002_03087	0.52	-1.4
3,442,161	-		MIT1002_03087	0.53	+2.3
3,442,168	+		MIT1002_03087	0.53	-0.7
3,442,176	-		MIT1002_03087	0.53	-0.4
3,442,187	-		MIT1002_03087	0.54	-1.0
3,442,193	-		MIT1002_03087	0.54	-0.1
3,442,317	+		MIT1002_03087	0.59	-0.1
3,442,325	-		MIT1002_03087	0.59	-1.6
3,442,332	+		MIT1002_03087	0.60	-0.5
3,442,340	-		MIT1002_03087	0.60	+0.6
3,442,372	-		MIT1002_03087	0.61	+0.7
3,442,418	-		MIT1002_03087	0.63	-1.3
3,442,470	-		MIT1002_03087	0.65	-2.0
3,442,529	+		MIT1002_03087	0.67	+0.8
3,442,529	+		MIT1002_03087	0.67	+0.7
3,442,547	-		MIT1002_03087	0.68	-0.0
3,442,547	-		MIT1002_03087	0.68	-1.7
3,442,547	-		MIT1002_03087	0.68	-1.0
3,442,617	+		MIT1002_03087	0.71	-1.5
3,442,617	-		MIT1002_03087	0.71	+0.5
3,442,644	+		MIT1002_03087	0.72	-0.6
3,442,663	+		MIT1002_03087	0.73	-0.2
3,442,680	+		MIT1002_03087	0.73	+0.3
3,442,706	-		MIT1002_03087	0.74	-0.5
3,442,722	+		MIT1002_03087	0.75	-1.2
3,442,754	-		MIT1002_03087	0.76	+1.1
3,442,756	+		MIT1002_03087	0.76	-0.9
3,442,756	+		MIT1002_03087	0.76	-1.2
3,442,804	-		MIT1002_03087	0.78	-2.4
3,442,836	-		MIT1002_03087	0.79	-2.8
3,442,855	+		MIT1002_03087	0.80	+0.3
3,442,863	-		MIT1002_03087	0.80	-1.1
3,442,879	-		MIT1002_03087	0.81	+0.8
3,442,928	+		MIT1002_03087	0.83	-0.7
3,442,928	-		MIT1002_03087	0.83	+0.0
3,442,930	+		MIT1002_03087	0.83	+0.8
3,442,936	-		MIT1002_03087	0.83	-0.6
3,442,936	-		MIT1002_03087	0.83	+0.2
3,442,941	+		MIT1002_03087	0.83	+0.6
3,442,949	-		MIT1002_03087	0.84	-0.7
3,442,971	-		MIT1002_03087	0.85	+1.1
3,442,982	+		MIT1002_03087	0.85	-1.7
3,443,031	+		MIT1002_03087	0.87	+0.4
3,443,031	+		MIT1002_03087	0.87	+0.1
3,443,031	+		MIT1002_03087	0.87	+1.1
3,443,031	+		MIT1002_03087	0.87	+1.2
3,443,031	+		MIT1002_03087	0.87	-0.2
3,443,039	-		MIT1002_03087	0.87	-0.3
3,443,039	-		MIT1002_03087	0.87	-1.2
3,443,082	+		MIT1002_03087	0.89	-1.3
3,443,098	+		MIT1002_03087	0.90	-0.0
3,443,100	-		MIT1002_03087	0.90	+0.5
3,443,147	+				-0.2
3,443,185	+				+0.7
3,443,206	-				+1.5
3,443,267	+				+0.6
3,443,323	-				-1.4
3,443,332	-				-0.1
3,443,332	-				-0.7
3,443,576	+		MIT1002_03088	0.15	-0.7
3,443,631	+		MIT1002_03088	0.21	-0.5
3,443,638	-		MIT1002_03088	0.22	+0.2
3,443,654	+		MIT1002_03088	0.24	+1.1
3,443,654	+		MIT1002_03088	0.24	+0.7
3,443,659	+		MIT1002_03088	0.24	-1.0
3,443,662	-		MIT1002_03088	0.25	+0.1
3,443,662	-		MIT1002_03088	0.25	+1.0
3,443,662	-		MIT1002_03088	0.25	-0.4
3,443,662	-		MIT1002_03088	0.25	-0.1
3,443,662	-		MIT1002_03088	0.25	-0.7
3,443,672	+		MIT1002_03088	0.26	-1.9
3,443,685	+		MIT1002_03088	0.27	-2.6
3,443,690	-		MIT1002_03088	0.28	+0.7
3,443,692	+		MIT1002_03088	0.28	-1.1
3,443,750	+		MIT1002_03088	0.35	+0.7
3,443,776	+		MIT1002_03088	0.38	-0.6
3,443,776	+		MIT1002_03088	0.38	-0.2
3,443,776	+		MIT1002_03088	0.38	+1.2
3,443,784	-		MIT1002_03088	0.39	+1.3
3,443,789	+		MIT1002_03088	0.39	+0.5
3,443,795	+		MIT1002_03088	0.40	+0.2
3,443,803	-		MIT1002_03088	0.41	+0.8
3,443,873	+		MIT1002_03088	0.49	-0.0
3,443,874	-		MIT1002_03088	0.49	-0.9
3,443,902	+		MIT1002_03088	0.52	+0.4
3,443,903	+		MIT1002_03088	0.52	+0.5
3,443,957	+		MIT1002_03088	0.58	+1.2
3,443,977	+		MIT1002_03088	0.61	+1.0
3,443,990	+		MIT1002_03088	0.62	-0.3
3,443,997	+		MIT1002_03088	0.63	-1.0
3,444,020	+		MIT1002_03088	0.66	+0.1
3,444,081	+		MIT1002_03088	0.72	-0.0
3,444,108	-		MIT1002_03088	0.76	-2.0
3,444,151	+		MIT1002_03088	0.80	-0.7
3,444,153	+		MIT1002_03088	0.81	+1.9
3,444,159	-		MIT1002_03088	0.81	-1.9
3,444,163	+		MIT1002_03088	0.82	+0.5
3,444,205	-		MIT1002_03088	0.87	-2.8
3,444,328	-				-0.2
3,444,344	-				+1.1
3,444,348	+				+2.6
3,444,348	+				-0.2
3,444,348	+				+0.0
3,444,348	+				+0.1
3,444,348	+				+0.1
3,444,356	-				-0.4
3,444,356	-				+1.0
3,444,356	-				+0.0
3,444,356	-				-0.8
3,444,356	-				-1.6
3,444,356	-				+0.5
3,444,356	-				-0.2
3,444,361	-				-1.0