Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03076

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,428,542	+		MIT1002_03075	0.27	-1.5
3,428,547	-		MIT1002_03075	0.27	+0.6
3,428,554	+		MIT1002_03075	0.28	+0.6
3,428,554	+		MIT1002_03075	0.28	-0.6
3,428,632	+		MIT1002_03075	0.34	+0.0
3,428,635	-		MIT1002_03075	0.34	-0.5
3,428,721	-		MIT1002_03075	0.41	+2.6
3,428,739	+		MIT1002_03075	0.42	+1.0
3,428,805	+		MIT1002_03075	0.48	+0.2
3,428,846	-		MIT1002_03075	0.51	+1.4
3,428,847	-		MIT1002_03075	0.51	-1.3
3,428,859	+		MIT1002_03075	0.52	+1.2
3,428,869	+		MIT1002_03075	0.53	-0.0
3,428,972	-		MIT1002_03075	0.61	+0.3
3,428,991	-		MIT1002_03075	0.62	+0.8
3,429,014	+		MIT1002_03075	0.64	-1.0
3,429,032	+		MIT1002_03075	0.66	+1.1
3,429,032	+		MIT1002_03075	0.66	+0.4
3,429,035	-		MIT1002_03075	0.66	-0.3
3,429,041	-		MIT1002_03075	0.66	+1.2
3,429,066	+		MIT1002_03075	0.68	+0.2
3,429,066	+		MIT1002_03075	0.68	+1.7
3,429,074	-		MIT1002_03075	0.69	+0.2
3,429,074	-		MIT1002_03075	0.69	-1.1
3,429,123	-		MIT1002_03075	0.73	-0.1
3,429,237	+		MIT1002_03075	0.82	-1.2
3,429,248	+		MIT1002_03075	0.83	+0.2
3,429,299	-		MIT1002_03075	0.87	+0.8
3,429,314	-		MIT1002_03075	0.88	-1.9
3,429,321	+		MIT1002_03075	0.89	+0.6
3,429,346	-				-0.4
3,429,353	-				-1.1
3,429,369	+				+0.1
3,429,369	+				-0.1
3,429,371	-				-1.8
3,429,377	-				-0.9
3,429,377	-				+0.9
3,429,377	-				-1.0
3,429,377	-				+0.0
3,429,377	-				+0.1
3,429,400	-				+1.0
3,429,400	-				+1.7
3,429,400	-				+0.2
3,429,463	+				+0.1
3,429,485	+				-1.3
3,429,521	+				-0.0
3,429,521	+				+0.1
3,429,521	+				+0.0
3,429,521	+				+0.2
3,429,588	-		MIT1002_03076	0.18	-0.1
3,429,635	+		MIT1002_03076	0.31	-0.5
3,429,801	-		MIT1002_03076	0.78	+1.5
3,429,801	-		MIT1002_03076	0.78	+0.7
3,429,801	-		MIT1002_03076	0.78	+0.5
3,429,952	-				+0.3
3,429,964	+				-1.0
3,429,964	+				-0.9
3,429,964	+				+0.2
3,430,022	-		MIT1002_03077	0.13	+1.3
3,430,023	+		MIT1002_03077	0.13	-0.5
3,430,023	-		MIT1002_03077	0.13	-1.9
3,430,053	+		MIT1002_03077	0.17	+0.1
3,430,151	+		MIT1002_03077	0.29	-0.9
3,430,166	+		MIT1002_03077	0.31	+0.5
3,430,166	+		MIT1002_03077	0.31	-0.3
3,430,166	+		MIT1002_03077	0.31	+0.7
3,430,174	-		MIT1002_03077	0.32	-0.3
3,430,195	+		MIT1002_03077	0.35	+0.5
3,430,198	-		MIT1002_03077	0.36	-0.9
3,430,198	-		MIT1002_03077	0.36	-0.4
3,430,203	+		MIT1002_03077	0.36	-1.8
3,430,280	-		MIT1002_03077	0.46	-0.1
3,430,280	-		MIT1002_03077	0.46	-2.4
3,430,354	+		MIT1002_03077	0.56	+0.8
3,430,354	+		MIT1002_03077	0.56	-0.9
3,430,354	+		MIT1002_03077	0.56	-0.3
3,430,354	+		MIT1002_03077	0.56	+0.6
3,430,362	-		MIT1002_03077	0.57	-1.7
3,430,362	-		MIT1002_03077	0.57	-1.1
3,430,362	-		MIT1002_03077	0.57	+0.4
3,430,362	-		MIT1002_03077	0.57	+0.1
3,430,362	-		MIT1002_03077	0.57	+0.3
3,430,423	+		MIT1002_03077	0.64	+0.8
3,430,445	+		MIT1002_03077	0.67	-0.8
3,430,571	+		MIT1002_03077	0.84	+0.7
3,430,696	+				+0.5
3,430,704	-				+0.3
3,430,713	-				-0.0
3,430,727	+				-0.2