Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03065

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,417,041	+		MIT1002_03063	0.85	-0.5
3,417,139	-				+3.1
3,417,141	+				-0.4
3,417,239	+				+0.2
3,417,252	-				+0.1
3,417,571	+		MIT1002_03064	0.73	-0.4
3,417,579	-		MIT1002_03064	0.75	+0.6
3,417,609	+		MIT1002_03064	0.82	+0.9
3,417,809	+				-1.0
3,417,957	+				-0.1
3,417,957	+				+1.1
3,417,960	-				+1.5
3,417,960	-				-1.3
3,418,037	+				-1.4
3,418,057	+				+0.7
3,418,067	-				-1.0
3,418,089	-				-0.4
3,418,089	-				-0.2
3,418,091	+				-0.1
3,418,099	-				-1.0
3,418,223	+				-0.0
3,418,223	+				+0.7
3,418,223	+				+0.8
3,418,247	-		MIT1002_03065	0.11	+0.9
3,418,259	+		MIT1002_03065	0.11	+1.0
3,418,474	+		MIT1002_03065	0.22	-1.9
3,418,512	-		MIT1002_03065	0.23	-0.4
3,418,542	+		MIT1002_03065	0.25	-0.7
3,418,568	-		MIT1002_03065	0.26	+0.8
3,418,749	+		MIT1002_03065	0.35	-1.0
3,418,757	-		MIT1002_03065	0.35	-0.5
3,418,778	+		MIT1002_03065	0.36	+1.8
3,418,796	-		MIT1002_03065	0.37	+1.8
3,418,802	-		MIT1002_03065	0.37	-1.5
3,419,006	-		MIT1002_03065	0.47	-0.1
3,419,018	+		MIT1002_03065	0.48	-0.5
3,419,018	+		MIT1002_03065	0.48	-0.1
3,419,083	-		MIT1002_03065	0.51	+0.1
3,419,089	-		MIT1002_03065	0.51	-2.1
3,419,098	+		MIT1002_03065	0.51	+0.7
3,419,129	-		MIT1002_03065	0.53	-1.2
3,419,180	-		MIT1002_03065	0.55	+1.9
3,419,197	+		MIT1002_03065	0.56	+0.3
3,419,247	-		MIT1002_03065	0.59	+0.5
3,419,287	+		MIT1002_03065	0.60	-1.5
3,419,293	+		MIT1002_03065	0.61	-0.3
3,419,301	-		MIT1002_03065	0.61	+0.0
3,419,417	-		MIT1002_03065	0.67	-0.4
3,419,437	-		MIT1002_03065	0.68	+1.1
3,419,437	-		MIT1002_03065	0.68	+0.4
3,419,505	-		MIT1002_03065	0.71	-0.1
3,419,505	-		MIT1002_03065	0.71	+0.1
3,419,505	-		MIT1002_03065	0.71	-1.6
3,419,505	-		MIT1002_03065	0.71	+0.5
3,419,518	+		MIT1002_03065	0.71	+0.7
3,419,562	-		MIT1002_03065	0.74	+0.4
3,419,766	+		MIT1002_03065	0.83	+0.5
3,419,788	+		MIT1002_03065	0.84	+0.0
3,419,788	+		MIT1002_03065	0.84	-1.4
3,419,796	-		MIT1002_03065	0.85	-0.1
3,419,796	-		MIT1002_03065	0.85	+0.4
3,419,805	+		MIT1002_03065	0.85	+0.4
3,419,807	-		MIT1002_03065	0.85	+0.5
3,419,813	-		MIT1002_03065	0.86	+2.5
3,419,852	+		MIT1002_03065	0.87	+0.5
3,419,912	-				+0.1
3,419,970	+				+0.5
3,419,970	+				+0.6
3,419,973	-				-1.0
3,419,978	-				+0.3
3,419,981	+				+0.5
3,419,981	+				+0.4
3,419,981	+				+2.2
3,419,981	+				+0.5
3,419,989	-				+0.4
3,419,989	-				-1.9
3,419,989	-				+0.9
3,419,989	-				-0.6
3,419,999	+				+0.6
3,420,060	-				-1.3
3,420,193	+		MIT1002_03066	0.25	+1.5
3,420,206	+		MIT1002_03066	0.29	-1.2
3,420,214	-		MIT1002_03066	0.31	+0.5
3,420,266	-		MIT1002_03066	0.46	-2.5
3,420,290	-		MIT1002_03066	0.54	+1.5
3,420,290	-		MIT1002_03066	0.54	+0.3
3,420,291	+		MIT1002_03066	0.54	-0.0
3,420,353	+		MIT1002_03066	0.72	+2.0
3,420,356	-		MIT1002_03066	0.73	+0.3
3,420,409	-		MIT1002_03066	0.89	-1.6
3,420,420	-				-0.6
3,420,496	-				-0.4
3,420,583	+				-0.9
3,420,607	+				+1.2
3,420,708	+				+0.8
3,420,708	+				-0.0
3,420,732	-				+1.6
3,420,767	+				-0.0
3,420,827	-				+0.6
3,420,834	-				-0.7
3,420,856	+		MIT1002_03067	0.11	+0.4
3,420,886	+		MIT1002_03067	0.13	+0.4
3,420,894	-		MIT1002_03067	0.13	+3.1
3,420,931	+		MIT1002_03067	0.15	+0.7
3,420,939	-		MIT1002_03067	0.15	+1.2
3,420,977	+		MIT1002_03067	0.17	+2.8
3,420,985	-		MIT1002_03067	0.18	-0.9
3,421,000	-		MIT1002_03067	0.19	+0.5
3,421,010	-		MIT1002_03067	0.19	+0.5