Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03060

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,412,955	+		MIT1002_03059	0.14	+0.5
3,412,955	+		MIT1002_03059	0.14	-0.9
3,413,027	+		MIT1002_03059	0.21	-2.3
3,413,027	+		MIT1002_03059	0.21	-1.0
3,413,027	+		MIT1002_03059	0.21	-1.4
3,413,027	+		MIT1002_03059	0.21	+1.3
3,413,027	+		MIT1002_03059	0.21	+0.7
3,413,027	+		MIT1002_03059	0.21	-1.0
3,413,027	+		MIT1002_03059	0.21	+0.3
3,413,027	+		MIT1002_03059	0.21	+0.4
3,413,027	+		MIT1002_03059	0.21	+0.5
3,413,027	+		MIT1002_03059	0.21	-1.2
3,413,027	+		MIT1002_03059	0.21	+1.5
3,413,027	+		MIT1002_03059	0.21	-2.3
3,413,027	+		MIT1002_03059	0.21	+1.0
3,413,027	+		MIT1002_03059	0.21	-1.7
3,413,035	-		MIT1002_03059	0.22	+0.2
3,413,035	-		MIT1002_03059	0.22	+0.2
3,413,035	-		MIT1002_03059	0.22	-1.3
3,413,035	-		MIT1002_03059	0.22	-0.7
3,413,035	-		MIT1002_03059	0.22	-1.1
3,413,035	-		MIT1002_03059	0.22	+0.6
3,413,035	-		MIT1002_03059	0.22	+1.6
3,413,035	-		MIT1002_03059	0.22	+0.1
3,413,035	-		MIT1002_03059	0.22	-1.3
3,413,035	-		MIT1002_03059	0.22	-0.7
3,413,035	-		MIT1002_03059	0.22	+0.4
3,413,035	-		MIT1002_03059	0.22	+0.6
3,413,035	-		MIT1002_03059	0.22	-1.9
3,413,035	-		MIT1002_03059	0.22	-2.5
3,413,077	+		MIT1002_03059	0.25	-0.8
3,413,077	+		MIT1002_03059	0.25	+1.6
3,413,077	+		MIT1002_03059	0.25	+1.8
3,413,080	-		MIT1002_03059	0.26	+0.9
3,413,085	-		MIT1002_03059	0.26	+0.1
3,413,085	-		MIT1002_03059	0.26	-1.0
3,413,085	-		MIT1002_03059	0.26	-0.0
3,413,085	-		MIT1002_03059	0.26	+0.1
3,413,085	-		MIT1002_03059	0.26	+0.9
3,413,270	-		MIT1002_03059	0.43	+1.5
3,413,367	+		MIT1002_03059	0.51	-2.6
3,413,444	+		MIT1002_03059	0.58	-0.1
3,413,444	+		MIT1002_03059	0.58	-0.6
3,413,444	+		MIT1002_03059	0.58	-0.3
3,413,444	+		MIT1002_03059	0.58	-0.2
3,413,444	+		MIT1002_03059	0.58	-0.6
3,413,444	+		MIT1002_03059	0.58	+0.2
3,413,444	+		MIT1002_03059	0.58	+1.4
3,413,444	+		MIT1002_03059	0.58	+1.7
3,413,444	+		MIT1002_03059	0.58	+0.3
3,413,444	+		MIT1002_03059	0.58	+1.1
3,413,444	+		MIT1002_03059	0.58	+2.2
3,413,444	+		MIT1002_03059	0.58	+2.1
3,413,444	+		MIT1002_03059	0.58	-0.5
3,413,444	+		MIT1002_03059	0.58	+0.0
3,413,444	+		MIT1002_03059	0.58	+0.5
3,413,444	+		MIT1002_03059	0.58	+0.0
3,413,450	-		MIT1002_03059	0.59	-0.3
3,413,452	-		MIT1002_03059	0.59	-0.3
3,413,452	-		MIT1002_03059	0.59	+0.4
3,413,452	-		MIT1002_03059	0.59	-1.8
3,413,452	-		MIT1002_03059	0.59	-0.2
3,413,452	-		MIT1002_03059	0.59	+1.1
3,413,452	-		MIT1002_03059	0.59	+0.6
3,413,452	-		MIT1002_03059	0.59	+3.1
3,413,452	-		MIT1002_03059	0.59	-0.9
3,413,452	-		MIT1002_03059	0.59	-0.7
3,413,452	-		MIT1002_03059	0.59	-2.0
3,413,452	-		MIT1002_03059	0.59	-0.1
3,413,681	-		MIT1002_03059	0.80	-0.6
3,413,690	-		MIT1002_03059	0.81	+0.4
3,413,762	+		MIT1002_03059	0.87	+0.4
3,413,872	+				+1.7
3,413,898	+				-0.7
3,414,007	+				-1.0
3,414,015	-				-0.9
3,414,029	+		MIT1002_03060	0.11	+1.0
3,414,037	-		MIT1002_03060	0.12	-2.2
3,414,193	+		MIT1002_03060	0.27	+1.2
3,414,201	-		MIT1002_03060	0.27	+0.0
3,414,201	-		MIT1002_03060	0.27	+1.0
3,414,267	-		MIT1002_03060	0.34	+0.5
3,414,272	-		MIT1002_03060	0.34	+1.5
3,414,277	-		MIT1002_03060	0.35	+3.1
3,414,322	+		MIT1002_03060	0.39	+0.3
3,414,330	-		MIT1002_03060	0.40	+1.2
3,414,330	-		MIT1002_03060	0.40	+0.2
3,414,396	+		MIT1002_03060	0.46	+1.6
3,414,427	-		MIT1002_03060	0.49	-0.5
3,414,488	+		MIT1002_03060	0.55	+1.1
3,414,580	+		MIT1002_03060	0.64	+0.7
3,414,580	+		MIT1002_03060	0.64	+0.5
3,414,580	+		MIT1002_03060	0.64	-1.6
3,414,588	-		MIT1002_03060	0.64	+1.1
3,414,628	+		MIT1002_03060	0.68	+0.5
3,414,644	+		MIT1002_03060	0.70	+1.1
3,414,652	-		MIT1002_03060	0.71	+0.6
3,414,674	-		MIT1002_03060	0.73	+0.5
3,414,676	-		MIT1002_03060	0.73	-1.0
3,414,809	-		MIT1002_03060	0.86	+1.8
3,414,902	+				+1.1
3,414,902	+				+0.2
3,414,910	-				+0.1
3,414,910	-				+0.8
3,414,923	-				+0.3
3,414,999	-				-0.6
3,415,033	-				+0.4
3,415,114	+		MIT1002_03061	0.19	-0.8
3,415,253	+		MIT1002_03061	0.39	-0.4
3,415,363	+		MIT1002_03061	0.55	-0.2
3,415,376	+		MIT1002_03061	0.57	+0.8
3,415,390	+		MIT1002_03061	0.59	-0.3
3,415,392	-		MIT1002_03061	0.59	+0.7
3,415,447	+		MIT1002_03061	0.67	-1.7
3,415,464	+		MIT1002_03061	0.70	+0.9
3,415,466	-		MIT1002_03061	0.70	-0.6
3,415,477	+		MIT1002_03061	0.71	-0.5
3,415,483	+		MIT1002_03061	0.72	+1.8
3,415,499	+		MIT1002_03061	0.75	+0.2
3,415,507	+		MIT1002_03061	0.76	-1.3
3,415,509	+		MIT1002_03061	0.76	-1.3
3,415,527	-		MIT1002_03061	0.79	+1.1
3,415,527	-		MIT1002_03061	0.79	-0.5
3,415,621	-				-0.6
3,415,621	-				-0.9
3,415,626	+				-0.4
3,415,639	+				-0.1
3,415,670	-				-0.4
3,415,687	+				-0.3
3,415,712	+				-0.2
3,415,783	-				-4.6
3,415,816	-				-4.2