Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02984

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,322,061	+				+0.1
3,322,082	+				+0.1
3,322,089	+				+0.9
3,322,170	-				-0.4
3,322,170	-				+0.9
3,322,170	-				+0.7
3,322,193	-				+0.9
3,322,205	-				+0.4
3,322,343	-		MIT1002_02984	0.12	+1.8
3,322,363	+		MIT1002_02984	0.13	+1.8
3,322,374	-		MIT1002_02984	0.14	-0.6
3,322,376	+		MIT1002_02984	0.14	+1.0
3,322,423	+		MIT1002_02984	0.18	+0.2
3,322,433	+		MIT1002_02984	0.19	-0.2
3,322,441	-		MIT1002_02984	0.19	+0.7
3,322,451	+		MIT1002_02984	0.20	+2.4
3,322,459	-		MIT1002_02984	0.21	+0.4
3,322,512	+		MIT1002_02984	0.25	+1.1
3,322,520	-		MIT1002_02984	0.25	+0.7
3,322,520	-		MIT1002_02984	0.25	+0.3
3,322,523	+		MIT1002_02984	0.25	+0.7
3,322,571	-		MIT1002_02984	0.29	-0.0
3,322,571	-		MIT1002_02984	0.29	-2.3
3,322,571	-		MIT1002_02984	0.29	-1.6
3,322,583	+		MIT1002_02984	0.30	+0.5
3,322,591	-		MIT1002_02984	0.31	+0.2
3,322,591	-		MIT1002_02984	0.31	+0.7
3,322,613	-		MIT1002_02984	0.32	+0.0
3,322,897	-		MIT1002_02984	0.54	+2.7
3,322,918	+		MIT1002_02984	0.55	+1.2
3,322,939	-		MIT1002_02984	0.57	+0.7
3,323,009	-		MIT1002_02984	0.62	-0.2
3,323,070	+		MIT1002_02984	0.67	+1.5
3,323,070	+		MIT1002_02984	0.67	+1.3
3,323,076	-		MIT1002_02984	0.67	+0.7
3,323,076	-		MIT1002_02984	0.67	-0.5
3,323,133	+		MIT1002_02984	0.72	+1.5
3,323,141	-		MIT1002_02984	0.72	+0.9
3,323,249	+		MIT1002_02984	0.80	-0.0
3,323,311	-		MIT1002_02984	0.85	+0.6
3,323,332	+		MIT1002_02984	0.87	+0.3
3,323,350	-		MIT1002_02984	0.88	-2.5
3,323,373	+		MIT1002_02984	0.90	+1.5
3,323,449	+				-0.0
3,323,451	-				+0.8
3,323,457	-				+0.2
3,323,462	-				+0.9
3,323,572	-				+0.5
3,323,590	+				-0.8
3,323,705	-		MIT1002_02985	0.22	+1.7
3,323,707	+		MIT1002_02985	0.22	+0.5
3,323,720	+		MIT1002_02985	0.25	+0.4
3,323,808	-		MIT1002_02985	0.40	-0.8
3,323,813	+		MIT1002_02985	0.41	+0.3
3,323,821	-		MIT1002_02985	0.43	-0.1
3,323,821	-		MIT1002_02985	0.43	+0.8
3,323,838	-		MIT1002_02985	0.46	-0.7
3,323,838	-		MIT1002_02985	0.46	+1.3
3,323,840	+		MIT1002_02985	0.46	+0.9
3,323,840	+		MIT1002_02985	0.46	-0.7
3,323,960	-		MIT1002_02985	0.67	-0.5
3,323,962	-		MIT1002_02985	0.67	-0.7
3,323,992	-		MIT1002_02985	0.73	-0.9
3,323,992	-		MIT1002_02985	0.73	-0.1
3,323,992	-		MIT1002_02985	0.73	-0.7
3,324,048	-		MIT1002_02985	0.83	+0.6
3,324,079	-		MIT1002_02985	0.88	+1.2
3,324,115	-				-1.0
3,324,165	-				+0.4
3,324,199	-				-0.3
3,324,288	-				-0.4
3,324,300	-				-1.2
3,324,338	+				-0.2
3,324,351	-				-0.5
3,324,356	-				-1.7
3,324,358	+				+0.9
3,324,360	+				-1.7
3,324,360	+				-2.2
3,324,360	+				-0.7
3,324,368	-				+0.5
3,324,368	-				+1.2
3,324,368	-				-0.8
3,324,370	+				-1.3
3,324,384	+				+1.8
3,324,404	+				-3.0