Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02913

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,236,967	-				-1.2
3,236,996	+				-0.2
3,237,015	+				-0.8
3,237,023	-				-0.1
3,237,023	-				-0.7
3,237,023	-				+0.4
3,237,023	-				+1.9
3,237,023	-				+0.8
3,237,025	+				+1.7
3,237,030	+				+1.1
3,237,033	-				-0.4
3,237,033	-				-1.4
3,237,038	-				-0.5
3,237,075	+		MIT1002_02912	0.12	-0.1
3,237,077	+		MIT1002_02912	0.12	-1.0
3,237,085	-		MIT1002_02912	0.13	+0.3
3,237,085	-		MIT1002_02912	0.13	+0.3
3,237,085	-		MIT1002_02912	0.13	-2.2
3,237,120	+		MIT1002_02912	0.16	-1.1
3,237,120	+		MIT1002_02912	0.16	+0.8
3,237,128	+		MIT1002_02912	0.17	-0.5
3,237,128	+		MIT1002_02912	0.17	+1.1
3,237,130	+		MIT1002_02912	0.17	-0.2
3,237,157	+		MIT1002_02912	0.20	+0.0
3,237,173	-		MIT1002_02912	0.22	-1.3
3,237,184	-		MIT1002_02912	0.23	-0.2
3,237,212	+		MIT1002_02912	0.25	+0.7
3,237,293	+		MIT1002_02912	0.34	-1.1
3,237,433	-		MIT1002_02912	0.48	-0.4
3,237,482	+		MIT1002_02912	0.53	-0.8
3,237,544	-		MIT1002_02912	0.59	-0.4
3,237,563	+		MIT1002_02912	0.61	-0.2
3,237,563	+		MIT1002_02912	0.61	-0.3
3,237,571	-		MIT1002_02912	0.62	+0.0
3,237,610	+		MIT1002_02912	0.66	+1.4
3,237,610	+		MIT1002_02912	0.66	-1.0
3,237,618	-		MIT1002_02912	0.66	+1.1
3,237,656	-		MIT1002_02912	0.70	+0.4
3,237,664	+		MIT1002_02912	0.71	-0.6
3,237,665	-		MIT1002_02912	0.71	+0.8
3,237,665	-		MIT1002_02912	0.71	-1.5
3,237,667	+		MIT1002_02912	0.71	+0.4
3,237,667	+		MIT1002_02912	0.71	+0.0
3,237,667	+		MIT1002_02912	0.71	+0.1
3,237,667	+		MIT1002_02912	0.71	-0.9
3,237,672	-		MIT1002_02912	0.72	+0.4
3,237,672	-		MIT1002_02912	0.72	+0.1
3,237,675	-		MIT1002_02912	0.72	-0.2
3,237,710	+		MIT1002_02912	0.76	+1.9
3,237,777	+		MIT1002_02912	0.83	+0.3
3,237,793	-		MIT1002_02912	0.84	+0.5
3,237,801	+		MIT1002_02912	0.85	-0.2
3,237,817	-		MIT1002_02912	0.87	+0.6
3,237,819	-		MIT1002_02912	0.87	-1.0
3,237,820	+		MIT1002_02912	0.87	-0.3
3,237,828	-		MIT1002_02912	0.88	+2.0
3,237,828	-		MIT1002_02912	0.88	+0.1
3,237,835	+		MIT1002_02912	0.88	-2.2
3,237,835	+		MIT1002_02912	0.88	+0.6
3,237,843	-		MIT1002_02912	0.89	+0.1
3,237,876	+				+0.2
3,237,888	+				+0.4
3,237,888	+				-0.2
3,237,888	+				-0.9
3,237,896	-				+0.2
3,237,896	-				-0.4
3,237,902	-				+0.8
3,237,988	-				-0.2
3,238,014	+		MIT1002_02913	0.12	-0.5
3,238,014	+		MIT1002_02913	0.12	+0.7
3,238,022	-		MIT1002_02913	0.14	+0.1
3,238,045	-		MIT1002_02913	0.19	+1.8
3,238,054	+		MIT1002_02913	0.21	-1.1
3,238,054	+		MIT1002_02913	0.21	+0.8
3,238,102	-		MIT1002_02913	0.31	+3.0
3,238,108	+		MIT1002_02913	0.32	+0.2
3,238,118	+		MIT1002_02913	0.34	+0.7
3,238,126	-		MIT1002_02913	0.36	+1.2
3,238,212	+		MIT1002_02913	0.54	+0.1
3,238,217	-		MIT1002_02913	0.55	-1.2
3,238,431	+				-0.7
3,238,603	+		MIT1002_02914	0.17	-0.8
3,238,636	-		MIT1002_02914	0.26	+0.4
3,238,665	-		MIT1002_02914	0.33	+0.6
3,238,698	-		MIT1002_02914	0.42	+0.8
3,238,715	-		MIT1002_02914	0.46	-0.3
3,238,757	+		MIT1002_02914	0.57	+0.1
3,238,778	-		MIT1002_02914	0.63	-0.9
3,238,794	+		MIT1002_02914	0.67	+1.0
3,238,802	-		MIT1002_02914	0.69	-1.4
3,238,829	+		MIT1002_02914	0.76	-0.7
3,238,838	-		MIT1002_02914	0.79	+0.4
3,238,838	-		MIT1002_02914	0.79	-0.4
3,238,856	+		MIT1002_02914	0.83	+0.1
3,238,921	-				+0.4
3,238,975	+				-1.0
3,239,054	-				-0.4
3,239,109	-				-0.3
3,239,212	-				-0.6
3,239,212	-				-0.0
3,239,256	+		MIT1002_02915	0.13	-0.1
3,239,332	+		MIT1002_02915	0.19	-0.2
3,239,361	+		MIT1002_02915	0.21	-3.1
3,239,382	+		MIT1002_02915	0.23	+1.0
3,239,382	+		MIT1002_02915	0.23	+0.2