Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02907

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,228,933	+		MIT1002_02905	0.67	+0.2
3,229,038	-		MIT1002_02905	0.83	-0.1
3,229,047	+		MIT1002_02905	0.84	-0.3
3,229,048	+		MIT1002_02905	0.84	-1.9
3,229,184	+				+0.0
3,229,196	+				-1.4
3,229,196	+				-2.3
3,229,196	+				-1.9
3,229,196	+				+2.1
3,229,204	+				+0.3
3,229,204	-				-1.2
3,229,204	-				-2.4
3,229,204	-				-2.3
3,229,204	-				-0.2
3,229,262	-		MIT1002_02906	0.10	+0.6
3,229,264	-		MIT1002_02906	0.11	-1.7
3,229,315	+		MIT1002_02906	0.21	-2.5
3,229,320	-		MIT1002_02906	0.22	+2.0
3,229,370	+		MIT1002_02906	0.31	+0.9
3,229,427	-		MIT1002_02906	0.42	-0.1
3,229,510	-		MIT1002_02906	0.59	-0.2
3,229,656	+		MIT1002_02906	0.87	+0.1
3,229,656	+		MIT1002_02906	0.87	-0.1
3,229,667	+		MIT1002_02906	0.89	+0.3
3,229,682	+				+1.2
3,229,682	-				+1.8
3,229,685	-				-0.5
3,229,706	-				+0.2
3,229,706	-				+0.6
3,229,732	+				-0.2
3,229,735	-				-0.1
3,229,772	-				-1.0
3,229,808	+				+2.3
3,229,808	+				+1.1
3,229,816	-				+0.2
3,229,816	-				-1.2
3,229,821	-				+0.6
3,229,848	+				+0.3
3,229,936	-				+0.1
3,229,953	-				+0.6
3,229,960	+				+0.1
3,229,966	-				-0.5
3,230,024	-		MIT1002_02907	0.13	+0.4
3,230,039	+		MIT1002_02907	0.15	-0.4
3,230,045	-		MIT1002_02907	0.16	+0.9
3,230,056	+		MIT1002_02907	0.17	+0.3
3,230,066	+		MIT1002_02907	0.18	+0.7
3,230,074	+		MIT1002_02907	0.19	+0.5
3,230,074	+		MIT1002_02907	0.19	+0.9
3,230,074	+		MIT1002_02907	0.19	+2.6
3,230,172	-		MIT1002_02907	0.30	+1.4
3,230,182	-		MIT1002_02907	0.31	+0.8
3,230,309	-		MIT1002_02907	0.46	-1.2
3,230,641	+		MIT1002_02907	0.84	+2.4
3,230,667	-		MIT1002_02907	0.88	+0.3
3,230,849	+				-1.0
3,230,849	+				-0.3
3,230,849	+				+2.1
3,230,857	-				-0.2
3,230,861	+				+1.1
3,230,928	+				+0.3
3,230,936	-				+3.4
3,231,216	-				+0.8
3,231,284	-				-1.0
3,231,495	-				-2.3
3,231,529	+				+1.3
3,231,551	+				-1.0
3,231,694	+		MIT1002_02908	0.16	+0.8
3,231,741	+		MIT1002_02908	0.19	+0.2