Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02806

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,109,836	+				-0.8
3,109,859	+				+0.0
3,109,867	+				-1.7
3,109,867	+				+1.1
3,109,867	-				+0.7
3,109,876	-				+0.1
3,109,914	+				+1.1
3,109,953	-				+1.8
3,110,037	+		MIT1002_02805	0.15	+1.1
3,110,145	-		MIT1002_02805	0.28	-1.1
3,110,208	-		MIT1002_02805	0.35	-0.4
3,110,299	+		MIT1002_02805	0.46	-2.6
3,110,299	+		MIT1002_02805	0.46	-0.6
3,110,351	-		MIT1002_02805	0.53	+0.8
3,110,359	+		MIT1002_02805	0.54	-1.6
3,110,392	-		MIT1002_02805	0.58	-1.2
3,110,438	+		MIT1002_02805	0.63	+0.3
3,110,486	+		MIT1002_02805	0.69	-0.3
3,110,494	-		MIT1002_02805	0.70	-0.0
3,110,496	-		MIT1002_02805	0.70	-0.4
3,110,557	-		MIT1002_02805	0.78	-0.5
3,110,557	-		MIT1002_02805	0.78	-0.4
3,110,677	-				+0.4
3,110,733	+				+1.3
3,110,784	-				-1.1
3,110,798	-				+0.7
3,110,824	+		MIT1002_02806	0.10	+1.9
3,110,824	+		MIT1002_02806	0.10	+0.7
3,110,830	-		MIT1002_02806	0.11	+0.9
3,110,841	+		MIT1002_02806	0.12	+1.1
3,110,849	-		MIT1002_02806	0.13	+0.0
3,110,849	-		MIT1002_02806	0.13	-1.1
3,110,856	+		MIT1002_02806	0.14	+0.6
3,110,873	+		MIT1002_02806	0.16	+1.9
3,110,902	-		MIT1002_02806	0.20	+0.2
3,110,942	-		MIT1002_02806	0.25	+0.9
3,111,030	+		MIT1002_02806	0.37	-0.0
3,111,059	+		MIT1002_02806	0.41	+0.3
3,111,059	+		MIT1002_02806	0.41	+2.4
3,111,108	+		MIT1002_02806	0.47	+0.7
3,111,126	+		MIT1002_02806	0.50	+0.3
3,111,134	-		MIT1002_02806	0.51	+1.2
3,111,176	-		MIT1002_02806	0.56	-1.4
3,111,248	-		MIT1002_02806	0.65	+1.6
3,111,304	-		MIT1002_02806	0.73	+0.7
3,111,338	+		MIT1002_02806	0.77	+1.4
3,111,369	+		MIT1002_02806	0.81	+0.9
3,111,417	-		MIT1002_02806	0.88	+1.1
3,111,417	-		MIT1002_02806	0.88	+0.2
3,111,424	+		MIT1002_02806	0.88	+0.4
3,111,424	+		MIT1002_02806	0.88	+0.4
3,111,424	+		MIT1002_02806	0.88	-0.9
3,111,432	-		MIT1002_02806	0.90	+1.0
3,111,514	+				+2.4
3,111,522	-				-2.4
3,111,579	+				-1.0
3,111,579	+				-0.2
3,111,587	+				+0.3
3,111,587	-				-0.2
3,111,595	-				+0.5
3,111,604	+				+0.6
3,111,604	+				+0.2
3,111,604	+				+1.5
3,111,612	-				+1.1
3,111,612	-				-1.8
3,111,623	-				+1.2
3,112,043	+		MIT1002_02807	0.36	-2.3
3,112,091	+		MIT1002_02807	0.42	-1.1
3,112,100	+		MIT1002_02807	0.43	-1.2
3,112,153	+		MIT1002_02807	0.50	-1.9
3,112,168	+		MIT1002_02807	0.52	-1.3
3,112,176	-		MIT1002_02807	0.53	+0.1
3,112,199	-		MIT1002_02807	0.56	-1.1
3,112,272	+		MIT1002_02807	0.65	-1.7
3,112,339	-		MIT1002_02807	0.74	-0.8
3,112,339	-		MIT1002_02807	0.74	-1.6