Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02716

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
3,018,935	-		MIT1002_02715	0.77	+0.1
3,019,005	-		MIT1002_02715	0.80	-1.6
3,019,117	-		MIT1002_02715	0.87	-2.1
3,019,426	-				+1.8
3,019,428	-				+1.8
3,019,428	-				+1.6
3,019,428	-				-0.1
3,019,428	-				-1.7
3,019,428	-				+0.9
3,019,563	+				+1.3
3,019,578	+				+0.7
3,019,594	-				-0.4
3,019,619	-				+0.2
3,019,621	+				+0.5
3,019,626	+				-1.1
3,019,634	-				+0.8
3,019,634	-				+1.1
3,019,636	+				-0.7
3,019,636	+				-0.3
3,019,636	+				-0.3
3,019,639	-				+0.5
3,019,649	+				-0.4
3,019,649	+				-1.2
3,019,657	-				+0.4
3,019,659	+				-2.3
3,019,659	+				+0.0
3,019,659	+				+0.3
3,019,659	+				+0.0
3,019,667	-				+1.8
3,019,667	-				-1.6
3,019,667	-				-0.5
3,019,667	-				-1.0
3,019,689	+				-0.9
3,019,692	+				+0.5
3,019,692	+				+0.1
3,019,694	+				-1.3
3,019,697	+				+1.3
3,019,697	+				-0.9
3,019,700	-				+0.4
3,019,700	-				+1.7
3,019,712	+				-0.1
3,019,720	-				+0.5
3,019,720	-				+1.9
3,019,738	+		MIT1002_02716	0.13	+1.1
3,019,738	+		MIT1002_02716	0.13	+1.1
3,019,738	+		MIT1002_02716	0.13	+1.4
3,019,746	-		MIT1002_02716	0.15	-0.1
3,020,240	+				-0.8
3,020,240	+				-0.1
3,020,241	-				+0.1
3,020,296	-		MIT1002_02717	0.12	-1.6
3,020,325	+		MIT1002_02717	0.14	-1.5
3,020,333	-		MIT1002_02717	0.15	-1.5
3,020,351	-		MIT1002_02717	0.16	-0.8
3,020,390	+		MIT1002_02717	0.19	-1.5
3,020,394	-		MIT1002_02717	0.20	-0.6
3,020,399	-		MIT1002_02717	0.20	-2.1
3,020,452	+		MIT1002_02717	0.25	-1.8
3,020,491	-		MIT1002_02717	0.28	-1.6
3,020,491	-		MIT1002_02717	0.28	-1.5
3,020,509	+		MIT1002_02717	0.30	-0.6
3,020,533	+		MIT1002_02717	0.32	-1.1
3,020,555	+		MIT1002_02717	0.33	-1.3
3,020,599	+		MIT1002_02717	0.37	-1.4
3,020,607	-		MIT1002_02717	0.38	-1.2
3,020,749	-		MIT1002_02717	0.50	-2.1
3,020,749	-		MIT1002_02717	0.50	-1.7
3,020,761	+		MIT1002_02717	0.51	-2.9
3,020,769	-		MIT1002_02717	0.51	-1.9
3,020,771	+		MIT1002_02717	0.52	-3.0
3,020,796	-		MIT1002_02717	0.54	-1.9
3,020,814	-		MIT1002_02717	0.55	-1.6
3,020,826	-		MIT1002_02717	0.56	+1.6
3,020,828	-		MIT1002_02717	0.56	-1.9
3,020,860	-		MIT1002_02717	0.59	-2.0
3,020,919	+		MIT1002_02717	0.64	-1.3
3,020,929	+		MIT1002_02717	0.65	-1.8
3,020,959	-		MIT1002_02717	0.68	-3.1
3,021,010	+		MIT1002_02717	0.72	-2.8
3,021,066	-		MIT1002_02717	0.77	-1.9