Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02669

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,966,227	-				+0.0
2,966,252	-				+0.7
2,966,269	+				-2.7
2,966,277	-				+0.5
2,966,314	+				-1.1
2,966,335	+				-1.1
2,966,343	-				+0.8
2,966,368	+				+1.8
2,966,374	-				+0.1
2,966,495	-				-0.6
2,966,579	-				-0.3
2,966,645	-		MIT1002_02669	0.14	+1.2
2,966,660	-		MIT1002_02669	0.15	+0.3
2,966,660	-		MIT1002_02669	0.15	-0.4
2,966,676	+		MIT1002_02669	0.17	+0.6
2,966,684	-		MIT1002_02669	0.18	-0.0
2,966,684	-		MIT1002_02669	0.18	-0.5
2,966,806	+		MIT1002_02669	0.31	+1.3
2,966,806	+		MIT1002_02669	0.31	-0.2
2,966,875	-		MIT1002_02669	0.38	+1.1
2,966,908	-		MIT1002_02669	0.42	-0.2
2,967,099	-		MIT1002_02669	0.62	+0.3
2,967,112	-		MIT1002_02669	0.63	+0.1
2,967,169	+		MIT1002_02669	0.69	+0.2
2,967,169	+		MIT1002_02669	0.69	+1.0
2,967,177	-		MIT1002_02669	0.70	+0.3
2,967,245	+		MIT1002_02669	0.78	+1.2
2,967,248	-		MIT1002_02669	0.78	+0.8
2,967,253	-		MIT1002_02669	0.78	+1.5
2,967,253	-		MIT1002_02669	0.78	-0.4
2,967,370	+				+1.0
2,967,378	-				+1.0
2,967,378	-				+1.9
2,967,405	+				-0.5
2,967,405	+				-0.9
2,967,412	-				-0.2
2,967,413	-				-0.0
2,967,659	+				-1.4
2,967,709	-		MIT1002_02670	0.11	+0.1
2,967,746	+		MIT1002_02670	0.15	+0.0
2,967,865	+		MIT1002_02670	0.28	-0.6
2,967,865	+		MIT1002_02670	0.28	+0.1
2,967,865	-		MIT1002_02670	0.28	+0.6
2,967,972	+		MIT1002_02670	0.40	-0.2
2,967,978	+		MIT1002_02670	0.40	+0.1
2,967,979	+		MIT1002_02670	0.40	+0.3
2,967,980	-		MIT1002_02670	0.41	-0.4
2,967,980	-		MIT1002_02670	0.41	-0.3
2,967,986	-		MIT1002_02670	0.41	-0.9
2,967,997	+		MIT1002_02670	0.42	+0.1
2,968,005	-		MIT1002_02670	0.43	-0.2
2,968,005	-		MIT1002_02670	0.43	-0.6
2,968,149	-		MIT1002_02670	0.59	-1.9
2,968,233	-		MIT1002_02670	0.68	+0.2
2,968,237	+		MIT1002_02670	0.69	-1.0
2,968,242	+		MIT1002_02670	0.69	-0.4
2,968,249	+		MIT1002_02670	0.70	+1.8
2,968,276	-		MIT1002_02670	0.73	+0.6
2,968,291	+		MIT1002_02670	0.75	+0.3
2,968,299	-		MIT1002_02670	0.76	+0.1
2,968,299	-		MIT1002_02670	0.76	+1.4
2,968,414	+		MIT1002_02670	0.88	+0.3