Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02588

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,887,562	+		MIT1002_02587	0.23	+0.0
2,887,603	-		MIT1002_02587	0.27	+0.0
2,887,769	+		MIT1002_02587	0.41	+1.0
2,888,059	-		MIT1002_02587	0.66	-0.9
2,888,195	-		MIT1002_02587	0.78	-0.4
2,888,217	-		MIT1002_02587	0.80	-0.5
2,888,316	+		MIT1002_02587	0.89	+0.3
2,888,324	-		MIT1002_02587	0.89	+0.3
2,888,365	+				-1.4
2,888,371	+				-0.3
2,888,599	+				+1.9
2,888,609	-				+3.2
2,888,655	+				+2.8
2,888,703	-		MIT1002_02588	0.12	+1.9
2,889,004	-		MIT1002_02588	0.30	+3.3
2,889,042	+		MIT1002_02588	0.32	+2.7
2,889,086	+		MIT1002_02588	0.35	+2.4
2,889,118	-		MIT1002_02588	0.37	+1.3
2,889,158	-		MIT1002_02588	0.39	+2.4
2,889,220	+		MIT1002_02588	0.43	+3.0
2,889,322	-		MIT1002_02588	0.49	+2.4
2,889,354	+		MIT1002_02588	0.51	+2.6
2,889,455	-		MIT1002_02588	0.57	+2.5
2,889,520	-		MIT1002_02588	0.61	+3.1
2,889,660	+		MIT1002_02588	0.70	+4.1
2,889,668	-		MIT1002_02588	0.70	+0.7
2,889,679	+		MIT1002_02588	0.71	+2.5
2,889,687	-		MIT1002_02588	0.71	+1.7
2,889,756	-		MIT1002_02588	0.75	+0.7
2,889,758	+		MIT1002_02588	0.75	+2.5
2,889,766	-		MIT1002_02588	0.76	+2.8
2,889,861	+		MIT1002_02588	0.82	+2.4
2,889,892	-		MIT1002_02588	0.84	+2.2
2,889,914	-		MIT1002_02588	0.85	+1.2
2,890,007	+				+3.2
2,890,127	+				+3.2
2,890,185	-				+1.4
2,890,210	-				+1.9
2,890,233	+				+0.0
2,890,413	-		MIT1002_02589	0.15	-1.6
2,890,423	-		MIT1002_02589	0.16	-1.8
2,890,423	-		MIT1002_02589	0.16	-0.6
2,890,530	+		MIT1002_02589	0.29	+1.6
2,890,530	+		MIT1002_02589	0.29	-1.1
2,890,626	-		MIT1002_02589	0.41	+0.2
2,890,636	+		MIT1002_02589	0.42	+0.7
2,890,644	-		MIT1002_02589	0.43	-0.1
2,890,644	-		MIT1002_02589	0.43	-0.9
2,890,659	-		MIT1002_02589	0.45	+0.3
2,890,722	-		MIT1002_02589	0.52	+0.1
2,890,761	+		MIT1002_02589	0.57	+0.3
2,890,769	-		MIT1002_02589	0.58	+0.1
2,890,920	-		MIT1002_02589	0.76	+0.1
2,890,928	+		MIT1002_02589	0.77	-0.5
2,890,929	+		MIT1002_02589	0.77	-0.5
2,890,948	+		MIT1002_02589	0.79	-1.0
2,891,015	-		MIT1002_02589	0.87	-0.5
2,891,015	-		MIT1002_02589	0.87	+0.5
2,891,015	-		MIT1002_02589	0.87	+0.6
2,891,125	+				-0.6
2,891,133	-				-3.5
2,891,160	+				+0.5
2,891,160	+				+0.2