Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02400

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,679,606	-				-1.6
2,679,707	-				+2.9
2,679,846	+				-2.5
2,679,871	+				-2.3
2,679,877	-				-3.0
2,679,882	+				-2.8
2,679,884	+				-2.6
2,679,896	+				-3.1
2,679,906	+				-4.2
2,680,058	+		MIT1002_02400	0.17	-1.8
2,680,081	+		MIT1002_02400	0.18	-2.7
2,680,345	-		MIT1002_02400	0.30	-3.6
2,680,438	+		MIT1002_02400	0.34	-2.9
2,680,473	+		MIT1002_02400	0.36	-3.2
2,680,495	-		MIT1002_02400	0.37	-1.5
2,680,514	-		MIT1002_02400	0.38	-1.8
2,680,514	-		MIT1002_02400	0.38	-2.7
2,680,514	-		MIT1002_02400	0.38	-1.1
2,680,545	-		MIT1002_02400	0.39	-3.2
2,680,550	-		MIT1002_02400	0.39	-2.3
2,680,551	+		MIT1002_02400	0.39	-1.8
2,680,592	+		MIT1002_02400	0.41	-2.4
2,680,592	-		MIT1002_02400	0.41	-1.7
2,680,594	+		MIT1002_02400	0.41	-2.4
2,680,594	+		MIT1002_02400	0.41	-2.1
2,680,597	-		MIT1002_02400	0.41	-3.9
2,680,597	-		MIT1002_02400	0.41	-4.2
2,680,602	-		MIT1002_02400	0.42	-2.5
2,680,633	+		MIT1002_02400	0.43	-1.8
2,680,634	+		MIT1002_02400	0.43	-1.5
2,680,640	-		MIT1002_02400	0.43	-0.1
2,680,670	-		MIT1002_02400	0.45	-2.9
2,680,677	-		MIT1002_02400	0.45	-1.1
2,680,721	+		MIT1002_02400	0.47	-3.6
2,680,769	+		MIT1002_02400	0.49	-3.8
2,680,769	+		MIT1002_02400	0.49	-1.4
2,680,830	+		MIT1002_02400	0.52	-1.1
2,680,848	-		MIT1002_02400	0.53	-2.9
2,680,874	+		MIT1002_02400	0.54	-3.0
2,680,876	+		MIT1002_02400	0.54	-2.1
2,680,876	+		MIT1002_02400	0.54	-3.9
2,680,876	+		MIT1002_02400	0.54	-4.2
2,680,882	-		MIT1002_02400	0.54	-2.1
2,680,884	-		MIT1002_02400	0.54	-2.3
2,680,901	-		MIT1002_02400	0.55	-2.4
2,681,032	-		MIT1002_02400	0.61	-4.4
2,681,040	-		MIT1002_02400	0.61	-4.1
2,681,069	+		MIT1002_02400	0.63	-3.7
2,681,077	-		MIT1002_02400	0.63	-1.1
2,681,092	-		MIT1002_02400	0.64	-2.6
2,681,094	-		MIT1002_02400	0.64	-4.2
2,681,108	-		MIT1002_02400	0.64	-2.2
2,681,192	+		MIT1002_02400	0.68	-1.3
2,681,215	-		MIT1002_02400	0.69	-3.3
2,681,248	+		MIT1002_02400	0.71	-2.9
2,681,316	-		MIT1002_02400	0.74	-2.6
2,681,439	-		MIT1002_02400	0.80	-3.1
2,681,443	+		MIT1002_02400	0.80	-1.5
2,681,456	-		MIT1002_02400	0.80	-3.1
2,681,493	-		MIT1002_02400	0.82	-1.8
2,681,495	-		MIT1002_02400	0.82	-3.0
2,681,626	+		MIT1002_02400	0.88	-3.1
2,681,692	-				-2.0
2,681,771	+				-3.1
2,681,771	+				-1.3
2,681,771	+				-2.2
2,681,779	-				-2.0
2,681,883	+				-2.0
2,681,893	-				+0.3