Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02396

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,671,845	+				-0.3
2,671,866	+		MIT1002_02395	0.12	+0.6
2,672,035	+		MIT1002_02395	0.31	-1.2
2,672,061	+		MIT1002_02395	0.34	+0.8
2,672,071	+		MIT1002_02395	0.35	-0.1
2,672,079	-		MIT1002_02395	0.36	-1.1
2,672,090	-		MIT1002_02395	0.38	-0.5
2,672,151	-		MIT1002_02395	0.44	-0.5
2,672,179	+		MIT1002_02395	0.48	-0.1
2,672,191	+		MIT1002_02395	0.49	+1.3
2,672,199	-		MIT1002_02395	0.50	+1.0
2,672,199	-		MIT1002_02395	0.50	+0.5
2,672,211	+		MIT1002_02395	0.51	+0.5
2,672,226	+		MIT1002_02395	0.53	+0.0
2,672,226	+		MIT1002_02395	0.53	-0.3
2,672,234	-		MIT1002_02395	0.54	-1.7
2,672,254	+		MIT1002_02395	0.56	-0.4
2,672,334	+		MIT1002_02395	0.65	+0.3
2,672,334	+		MIT1002_02395	0.65	-0.3
2,672,363	-		MIT1002_02395	0.68	+0.8
2,672,387	-		MIT1002_02395	0.71	+0.4
2,672,395	+		MIT1002_02395	0.72	-0.3
2,672,532	-		MIT1002_02395	0.87	+0.4
2,672,537	-		MIT1002_02395	0.88	+0.5
2,672,597	-				+3.7
2,672,597	-				+0.9
2,672,655	+				-1.7
2,672,724	+				-1.6
2,672,741	-				-0.8
2,672,780	+				+0.0
2,672,844	+				+1.3
2,672,883	+		MIT1002_02396	0.16	+0.5
2,672,927	+		MIT1002_02396	0.26	-0.2
2,672,949	+		MIT1002_02396	0.31	+0.2
2,672,957	-		MIT1002_02396	0.33	+1.0
2,672,971	+		MIT1002_02396	0.36	+1.1
2,672,986	+		MIT1002_02396	0.40	+1.6
2,673,010	-		MIT1002_02396	0.45	+1.1
2,673,101	-		MIT1002_02396	0.67	+0.4
2,673,109	-		MIT1002_02396	0.69	+1.8
2,673,120	+		MIT1002_02396	0.71	+2.9
2,673,212	+				+0.2
2,673,251	-				+1.0
2,673,304	+				-0.5
2,673,333	-				+0.1
2,673,358	+				+1.1
2,673,366	-				-0.1
2,673,373	+				+0.4
2,673,373	+				+0.3
2,673,396	-				-0.0
2,673,436	+				+1.5
2,673,477	+				+0.1
2,673,534	+		MIT1002_02397	0.12	+2.1
2,673,686	+		MIT1002_02397	0.22	+1.9
2,673,694	-		MIT1002_02397	0.23	-0.5
2,673,728	+		MIT1002_02397	0.25	-1.1
2,673,747	-		MIT1002_02397	0.26	+0.2
2,673,854	+		MIT1002_02397	0.33	-1.5
2,673,884	+		MIT1002_02397	0.35	+0.3
2,673,949	-		MIT1002_02397	0.39	+0.6
2,673,954	+		MIT1002_02397	0.39	+0.4
2,673,954	+		MIT1002_02397	0.39	-0.5
2,673,959	+		MIT1002_02397	0.40	-0.2
2,673,962	-		MIT1002_02397	0.40	-0.1
2,673,962	-		MIT1002_02397	0.40	+0.0
2,673,967	-		MIT1002_02397	0.40	-0.1
2,673,967	-		MIT1002_02397	0.40	+1.2
2,673,967	-		MIT1002_02397	0.40	-1.4
2,674,090	-		MIT1002_02397	0.48	-0.3
2,674,099	+		MIT1002_02397	0.49	+0.2
2,674,159	+		MIT1002_02397	0.53	-1.6
2,674,167	+		MIT1002_02397	0.53	-0.9
2,674,167	+		MIT1002_02397	0.53	+0.6
2,674,167	+		MIT1002_02397	0.53	+2.0
2,674,167	+		MIT1002_02397	0.53	+0.5
2,674,167	+		MIT1002_02397	0.53	-0.7
2,674,167	+		MIT1002_02397	0.53	-1.2
2,674,167	+		MIT1002_02397	0.53	-0.1
2,674,175	-		MIT1002_02397	0.54	-1.0
2,674,175	-		MIT1002_02397	0.54	+1.4
2,674,175	-		MIT1002_02397	0.54	-0.5
2,674,175	-		MIT1002_02397	0.54	+0.0
2,674,175	-		MIT1002_02397	0.54	-1.0
2,674,175	-		MIT1002_02397	0.54	-1.6
2,674,175	-		MIT1002_02397	0.54	-0.0
2,674,217	-		MIT1002_02397	0.56	-0.6