Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02383

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,659,197	+				-0.3
2,659,348	-		MIT1002_02381	0.43	-0.8
2,659,373	+		MIT1002_02381	0.50	-1.5
2,659,373	+		MIT1002_02381	0.50	+0.3
2,659,444	-		MIT1002_02381	0.72	-2.4
2,659,505	+				+0.7
2,659,662	-		MIT1002_02382	0.22	-0.2
2,659,674	+		MIT1002_02382	0.25	+1.0
2,659,684	-		MIT1002_02382	0.26	-0.7
2,659,693	+		MIT1002_02382	0.28	+0.3
2,659,701	-		MIT1002_02382	0.30	+1.8
2,659,711	+		MIT1002_02382	0.31	-0.2
2,659,711	+		MIT1002_02382	0.31	-1.7
2,659,769	-		MIT1002_02382	0.42	+1.1
2,659,769	-		MIT1002_02382	0.42	-0.7
2,659,769	-		MIT1002_02382	0.42	+1.3
2,659,769	-		MIT1002_02382	0.42	+0.7
2,659,804	+		MIT1002_02382	0.49	+1.4
2,659,812	-		MIT1002_02382	0.50	+0.9
2,659,917	+		MIT1002_02382	0.70	+1.1
2,659,922	+		MIT1002_02382	0.71	-1.7
2,659,983	-		MIT1002_02382	0.82	+0.3
2,659,985	+		MIT1002_02382	0.82	+0.3
2,660,093	+				+1.5
2,660,218	+		MIT1002_02383	0.33	+0.3
2,660,237	-		MIT1002_02383	0.40	+0.0
2,660,242	+		MIT1002_02383	0.42	-0.9
2,660,261	+		MIT1002_02383	0.50	-0.2
2,660,273	-		MIT1002_02383	0.54	-1.2
2,660,295	-		MIT1002_02383	0.63	-0.1
2,660,357	+		MIT1002_02383	0.87	-0.3
2,660,365	-				-0.1
2,660,365	-				+0.4
2,660,365	-				-0.6
2,660,365	-				+0.0
2,660,365	-				+0.7
2,660,396	+				-3.1
2,660,396	+				-0.6
2,660,461	+				-0.5
2,660,461	+				+0.3
2,660,469	-				-3.6
2,660,473	+		MIT1002_02384	0.10	+1.5
2,660,480	-		MIT1002_02384	0.11	-1.4
2,660,515	-		MIT1002_02384	0.17	-0.1
2,660,527	-		MIT1002_02384	0.19	-0.5
2,660,561	-		MIT1002_02384	0.25	+1.4
2,660,649	+		MIT1002_02384	0.40	-0.1
2,660,654	+		MIT1002_02384	0.41	+0.5
2,660,662	-		MIT1002_02384	0.43	-0.3
2,660,662	-		MIT1002_02384	0.43	+0.9
2,660,662	-		MIT1002_02384	0.43	+0.6
2,660,662	-		MIT1002_02384	0.43	-0.2
2,660,662	-		MIT1002_02384	0.43	+0.0
2,660,693	-		MIT1002_02384	0.48	+0.4
2,660,795	-		MIT1002_02384	0.66	-0.7
2,660,828	+		MIT1002_02384	0.71	+0.7
2,660,828	+		MIT1002_02384	0.71	+1.7
2,660,828	+		MIT1002_02384	0.71	-0.9
2,660,828	+		MIT1002_02384	0.71	-0.2
2,660,828	+		MIT1002_02384	0.71	+1.2
2,660,828	+		MIT1002_02384	0.71	-0.6
2,660,828	+		MIT1002_02384	0.71	+0.3
2,660,828	+		MIT1002_02384	0.71	+1.0
2,660,836	-		MIT1002_02384	0.73	-0.6
2,660,836	-		MIT1002_02384	0.73	-0.8
2,660,836	-		MIT1002_02384	0.73	+0.1
2,660,836	-		MIT1002_02384	0.73	+0.1
2,660,836	-		MIT1002_02384	0.73	+0.5
2,660,836	-		MIT1002_02384	0.73	+0.3
2,660,836	-		MIT1002_02384	0.73	-1.7
2,660,836	-		MIT1002_02384	0.73	+0.9
2,660,853	-		MIT1002_02384	0.76	+0.6
2,660,890	+		MIT1002_02384	0.82	+0.3
2,660,903	-		MIT1002_02384	0.84	-2.3
2,660,946	+				+0.5
2,660,946	+				+0.7
2,660,946	+				+0.5
2,660,946	+				+1.8
2,660,946	+				-2.2
2,660,946	+				+0.7
2,660,946	+				+1.7
2,661,011	+				+1.2
2,661,019	-				-1.5
2,661,103	+				+1.0
2,661,120	+				+0.8
2,661,139	-				-0.1
2,661,216	+				-1.7
2,661,291	+				+1.9
2,661,348	-				+0.1