Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02279

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,539,363	+		MIT1002_02278	0.60	-0.7
2,539,371	-		MIT1002_02278	0.61	+0.0
2,539,418	-		MIT1002_02278	0.63	+1.0
2,539,461	+		MIT1002_02278	0.65	-1.2
2,539,538	+		MIT1002_02278	0.68	+0.0
2,539,563	+		MIT1002_02278	0.69	-0.2
2,539,564	-		MIT1002_02278	0.69	-0.1
2,539,869	+		MIT1002_02278	0.82	-0.8
2,539,869	+		MIT1002_02278	0.82	+0.6
2,539,874	+		MIT1002_02278	0.83	+0.3
2,539,874	+		MIT1002_02278	0.83	-1.1
2,540,021	+		MIT1002_02278	0.89	-0.7
2,540,064	+				+0.6
2,540,089	+				+1.2
2,540,131	+				-1.9
2,540,295	+				-0.2
2,540,329	-				-1.6
2,540,403	+		MIT1002_02279	0.17	+0.5
2,540,403	+		MIT1002_02279	0.17	+1.0
2,540,411	-		MIT1002_02279	0.20	+0.8
2,540,429	+		MIT1002_02279	0.25	+1.6
2,540,429	+		MIT1002_02279	0.25	+1.0
2,540,437	-		MIT1002_02279	0.27	+0.2
2,540,552	-		MIT1002_02279	0.59	+0.3
2,540,597	-		MIT1002_02279	0.72	+1.3
2,540,625	+		MIT1002_02279	0.80	-0.3