Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02188

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,444,044	-		MIT1002_02187	0.68	+0.5
2,444,056	-		MIT1002_02187	0.69	-0.7
2,444,075	-		MIT1002_02187	0.69	-0.3
2,444,180	-		MIT1002_02187	0.74	+1.6
2,444,213	+		MIT1002_02187	0.75	+0.8
2,444,249	+		MIT1002_02187	0.77	-0.2
2,444,286	+		MIT1002_02187	0.78	+1.3
2,444,385	+		MIT1002_02187	0.83	-0.4
2,444,456	-		MIT1002_02187	0.86	+2.1
2,444,474	+		MIT1002_02187	0.87	-0.6
2,444,474	+		MIT1002_02187	0.87	+1.1
2,444,482	-		MIT1002_02187	0.87	+0.5
2,444,526	+		MIT1002_02187	0.89	+1.9
2,444,541	+		MIT1002_02187	0.89	-1.6
2,444,662	+				+0.7
2,444,662	+				+0.4
2,444,726	+				+0.6
2,444,793	-				-0.6
2,444,827	+				-0.2
2,444,833	-				-0.3
2,444,835	-				-1.8
2,444,835	-				+0.3
2,444,835	-				+0.2
2,444,856	-				-0.6
2,444,856	-				+0.6
2,444,905	-				+0.4
2,445,018	-				+0.5
2,445,029	+		MIT1002_02188	0.11	-2.7
2,445,036	-		MIT1002_02188	0.14	-0.6
2,445,047	-		MIT1002_02188	0.18	-1.2
2,445,047	-		MIT1002_02188	0.18	-1.3
2,445,068	+		MIT1002_02188	0.25	-2.1
2,445,078	-		MIT1002_02188	0.28	-0.3
2,445,119	+		MIT1002_02188	0.43	-0.3
2,445,119	+		MIT1002_02188	0.43	-1.7
2,445,127	-		MIT1002_02188	0.45	-0.9
2,445,291	-				-3.1