Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02083

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,342,107	-		MIT1002_02082	0.28	-0.6
2,342,198	+		MIT1002_02082	0.35	-0.5
2,342,206	-		MIT1002_02082	0.35	+0.2
2,342,213	+		MIT1002_02082	0.36	-1.5
2,342,240	-		MIT1002_02082	0.38	-1.8
2,342,255	-		MIT1002_02082	0.39	-0.5
2,342,293	+		MIT1002_02082	0.42	+0.6
2,342,296	-		MIT1002_02082	0.42	-0.1
2,342,302	+		MIT1002_02082	0.43	+0.4
2,342,310	-		MIT1002_02082	0.43	+0.6
2,342,310	-		MIT1002_02082	0.43	-1.0
2,342,322	+		MIT1002_02082	0.44	+0.2
2,342,335	-		MIT1002_02082	0.45	-0.2
2,342,439	+		MIT1002_02082	0.53	+0.5
2,342,447	-		MIT1002_02082	0.53	+1.7
2,342,452	+		MIT1002_02082	0.54	+1.2
2,342,610	+		MIT1002_02082	0.66	-0.8
2,342,625	-		MIT1002_02082	0.67	+0.7
2,342,719	-		MIT1002_02082	0.74	-0.9
2,342,757	-		MIT1002_02082	0.77	+1.0
2,342,868	-		MIT1002_02082	0.85	-0.3
2,342,870	+		MIT1002_02082	0.85	-1.7
2,342,870	+		MIT1002_02082	0.85	+1.1
2,342,870	+		MIT1002_02082	0.85	-0.1
2,342,893	-		MIT1002_02082	0.87	+0.8
2,342,941	-				-0.1
2,342,951	+				+0.1
2,343,131	+				+1.6
2,343,140	-				-0.4
2,343,150	-				-0.8
2,343,153	+				+0.0
2,343,153	+				-1.3
2,343,161	+				+0.5
2,343,161	-				-0.2
2,343,169	-				+1.4
2,343,170	+				+1.1
2,343,181	+				+0.2
2,343,185	-				-0.7
2,343,196	-				-2.0
2,343,226	+				+1.7
2,343,233	+				-0.8
2,343,285	+		MIT1002_02083	0.11	-0.9
2,343,600	-		MIT1002_02083	0.28	+0.3
2,343,628	+		MIT1002_02083	0.29	+1.1
2,343,636	-		MIT1002_02083	0.30	+0.9
2,343,676	+		MIT1002_02083	0.32	-0.1
2,343,684	-		MIT1002_02083	0.32	-0.9
2,343,690	+		MIT1002_02083	0.32	+0.1
2,343,713	+		MIT1002_02083	0.34	-2.6
2,343,774	+		MIT1002_02083	0.37	+0.8
2,343,782	-		MIT1002_02083	0.37	-2.3
2,343,812	+		MIT1002_02083	0.39	+0.1
2,343,878	-		MIT1002_02083	0.42	-0.7
2,343,879	+		MIT1002_02083	0.43	-0.2
2,343,913	+		MIT1002_02083	0.44	-0.0
2,343,976	-		MIT1002_02083	0.48	+0.2
2,344,080	-		MIT1002_02083	0.53	-0.1
2,344,082	+		MIT1002_02083	0.53	-1.8
2,344,085	-		MIT1002_02083	0.53	+0.3
2,344,099	-		MIT1002_02083	0.54	+0.7
2,344,100	-		MIT1002_02083	0.54	-0.4
2,344,273	+		MIT1002_02083	0.63	-0.2
2,344,281	-		MIT1002_02083	0.64	+0.3
2,344,288	+		MIT1002_02083	0.64	+0.2
2,344,288	+		MIT1002_02083	0.64	-0.2
2,344,291	-		MIT1002_02083	0.64	+0.3
2,344,499	-		MIT1002_02083	0.75	+0.0
2,344,543	-		MIT1002_02083	0.78	+0.2
2,344,596	-		MIT1002_02083	0.81	-0.7
2,344,618	-		MIT1002_02083	0.82	+0.7
2,344,654	+		MIT1002_02083	0.84	+1.5
2,344,702	+		MIT1002_02083	0.86	-0.9
2,344,809	+				+0.7
2,344,916	-				+0.4
2,344,916	-				-1.9
2,344,918	+				+0.4
2,344,936	+				-1.2
2,344,962	+				+1.6
2,344,962	+				+0.1
2,344,962	+				+1.8
2,344,970	-				+0.4
2,344,974	+				-0.8
2,344,982	-				+0.0
2,345,041	-				-0.8
2,345,079	+				+1.0
2,345,114	+				+0.4
2,345,122	-				-0.2
2,345,210	+				-1.5
2,345,210	+				-0.1
2,345,210	+				-0.3
2,345,210	+				-2.7
2,345,218	-				-3.4
2,345,231	-				-1.5
2,345,450	-		MIT1002_02084	0.18	-2.0
2,345,450	-		MIT1002_02084	0.18	+0.9
2,345,450	-		MIT1002_02084	0.18	+0.2
2,345,522	+		MIT1002_02084	0.21	-0.9
2,345,703	+		MIT1002_02084	0.28	-3.2
2,345,706	-		MIT1002_02084	0.28	-1.6
2,345,857	-		MIT1002_02084	0.35	-1.0
2,345,884	+		MIT1002_02084	0.36	+1.7
2,345,940	-		MIT1002_02084	0.38	+0.0
2,345,942	+		MIT1002_02084	0.38	+2.5
2,345,949	+		MIT1002_02084	0.38	-0.9