Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02025

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,264,435	+				+0.6
2,264,457	+				-0.7
2,264,475	-		MIT1002_02023	0.15	-1.0
2,264,510	+		MIT1002_02023	0.27	-0.3
2,264,541	+		MIT1002_02023	0.38	-0.3
2,264,541	+		MIT1002_02023	0.38	-1.0
2,264,549	-		MIT1002_02023	0.41	+0.3
2,264,549	-		MIT1002_02023	0.41	+0.3
2,264,549	-		MIT1002_02023	0.41	-0.3
2,264,549	-		MIT1002_02023	0.41	-1.8
2,264,549	-		MIT1002_02023	0.41	+0.4
2,264,673	-		MIT1002_02023	0.84	+0.9
2,264,694	-				-1.9
2,264,702	-				-1.4
2,264,763	+				-1.6
2,264,771	-				-1.8
2,264,930	-		MIT1002_02024	0.29	+0.1
2,265,254	+		MIT1002_02024	0.77	-2.9
2,265,262	-		MIT1002_02024	0.78	-0.8
2,265,262	-		MIT1002_02024	0.78	-0.6
2,265,302	+		MIT1002_02024	0.84	-0.4
2,265,342	-				-1.7
2,265,390	+				-1.5
2,265,390	+				-1.1
2,265,529	-				-0.4
2,265,559	+				-0.1
2,265,567	-				-1.9
2,265,616	+		MIT1002_02025	0.10	-2.5
2,265,720	+		MIT1002_02025	0.15	-0.8
2,265,720	+		MIT1002_02025	0.15	-3.6
2,265,728	-		MIT1002_02025	0.16	-1.7
2,265,728	-		MIT1002_02025	0.16	-0.4
2,265,740	-		MIT1002_02025	0.16	-0.8
2,265,761	-		MIT1002_02025	0.17	-0.1
2,265,807	+		MIT1002_02025	0.19	-0.6
2,265,996	+		MIT1002_02025	0.29	-1.6
2,266,032	+		MIT1002_02025	0.30	-0.6
2,266,034	-		MIT1002_02025	0.31	-1.8
2,266,084	+		MIT1002_02025	0.33	-2.6
2,266,132	+		MIT1002_02025	0.35	-1.8
2,266,140	-		MIT1002_02025	0.36	+0.2
2,266,162	-		MIT1002_02025	0.37	-0.4
2,266,165	+		MIT1002_02025	0.37	-0.6
2,266,228	-		MIT1002_02025	0.40	-2.0
2,266,497	+		MIT1002_02025	0.53	-1.6
2,266,637	+		MIT1002_02025	0.60	-1.9
2,266,701	+		MIT1002_02025	0.63	-2.8
2,266,740	+		MIT1002_02025	0.65	-0.4
2,266,821	+		MIT1002_02025	0.69	-0.1
2,266,859	+		MIT1002_02025	0.71	-0.9
2,266,935	+		MIT1002_02025	0.75	-1.6
2,266,950	+		MIT1002_02025	0.75	-1.7
2,267,109	+		MIT1002_02025	0.83	-1.5
2,267,111	+		MIT1002_02025	0.83	+0.2
2,267,472	+				+3.2
2,267,697	+		MIT1002_02026	0.12	+0.3
2,267,700	-		MIT1002_02026	0.12	+0.2
2,267,700	-		MIT1002_02026	0.12	-1.2
2,267,761	+		MIT1002_02026	0.17	-2.6
2,267,811	+		MIT1002_02026	0.21	+0.1
2,267,811	+		MIT1002_02026	0.21	+0.6
2,267,811	+		MIT1002_02026	0.21	-0.9
2,267,813	+		MIT1002_02026	0.21	+0.4
2,267,827	-		MIT1002_02026	0.22	-3.5
2,267,846	+		MIT1002_02026	0.23	+2.2
2,267,846	+		MIT1002_02026	0.23	+2.9
2,267,874	-		MIT1002_02026	0.25	-0.8
2,267,885	+		MIT1002_02026	0.26	-0.4
2,268,022	+		MIT1002_02026	0.37	-4.2
2,268,027	+		MIT1002_02026	0.37	-0.7
2,268,047	+		MIT1002_02026	0.38	-1.1
2,268,179	+		MIT1002_02026	0.48	-0.4
2,268,206	+		MIT1002_02026	0.50	-1.2
2,268,223	+		MIT1002_02026	0.52	-0.5
2,268,223	+		MIT1002_02026	0.52	+0.7
2,268,231	+		MIT1002_02026	0.52	-0.7
2,268,273	+		MIT1002_02026	0.55	+1.4
2,268,344	+		MIT1002_02026	0.61	+1.7
2,268,396	-		MIT1002_02026	0.65	-1.1
2,268,430	+		MIT1002_02026	0.67	+0.5