Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02009

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,244,376	+		MIT1002_02008	0.49	-1.7
2,244,384	-		MIT1002_02008	0.50	-1.4
2,244,704	-		MIT1002_02008	0.72	-3.2
2,244,754	-		MIT1002_02008	0.76	-1.5
2,244,859	+		MIT1002_02008	0.83	-4.3
2,244,866	-		MIT1002_02008	0.83	-3.1
2,244,954	+		MIT1002_02008	0.90	-2.5
2,244,964	+				-2.5
2,244,964	+				-4.6
2,244,984	-				-4.1
2,245,009	+				-1.4
2,245,014	+				+0.2
2,245,141	-				-2.1
2,245,284	+				-1.0
2,245,284	+				-0.6
2,245,311	-				-0.1
2,246,834	-				-1.9
2,246,979	+				+0.2
2,247,146	+				+0.2
2,247,248	-				+0.2
2,247,368	-		MIT1002_02010	0.18	-2.1
2,247,401	+		MIT1002_02010	0.21	-0.5
2,247,401	+		MIT1002_02010	0.21	-0.5
2,247,401	+		MIT1002_02010	0.21	-0.1
2,247,414	-		MIT1002_02010	0.22	+0.9
2,247,468	+		MIT1002_02010	0.26	-0.9
2,247,482	+		MIT1002_02010	0.27	+0.2
2,247,561	+		MIT1002_02010	0.33	-0.2
2,247,569	-		MIT1002_02010	0.34	+0.2
2,247,574	+		MIT1002_02010	0.34	-0.6
2,247,591	+		MIT1002_02010	0.35	+0.0
2,247,652	+		MIT1002_02010	0.40	-0.2
2,247,665	-		MIT1002_02010	0.41	-2.2
2,247,779	+		MIT1002_02010	0.50	+0.7
2,247,779	+		MIT1002_02010	0.50	+0.4
2,247,779	+		MIT1002_02010	0.50	+0.2
2,247,787	-		MIT1002_02010	0.50	-0.8