Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01963

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,191,544	-		MIT1002_01962	0.55	-0.0
2,191,545	-		MIT1002_01962	0.55	-0.0
2,191,566	-		MIT1002_01962	0.57	-0.2
2,191,566	-		MIT1002_01962	0.57	+1.0
2,191,568	+		MIT1002_01962	0.57	-0.8
2,191,670	+		MIT1002_01962	0.63	-0.1
2,191,835	-		MIT1002_01962	0.72	-0.9
2,191,856	-		MIT1002_01962	0.74	-0.6
2,191,906	+		MIT1002_01962	0.77	+1.3
2,191,914	-		MIT1002_01962	0.77	-0.1
2,191,993	+		MIT1002_01962	0.82	-1.2
2,191,995	+		MIT1002_01962	0.82	-0.6
2,192,003	-		MIT1002_01962	0.82	-0.6
2,192,068	+		MIT1002_01962	0.86	-0.1
2,192,072	-		MIT1002_01962	0.86	-0.9
2,192,093	+		MIT1002_01962	0.88	-0.5
2,192,093	+		MIT1002_01962	0.88	-0.8
2,192,101	-		MIT1002_01962	0.88	-0.5
2,192,101	-		MIT1002_01962	0.88	+1.8
2,192,110	+		MIT1002_01962	0.89	+0.3
2,192,176	+				-2.4
2,192,176	+				+0.1
2,192,208	+				+0.1
2,192,213	+				-0.1
2,192,213	+				+0.6
2,192,213	+				-1.0
2,192,221	-				+1.5
2,192,221	-				-2.8
2,192,228	+				+1.6
2,192,235	-				-1.8
2,192,268	-				+2.6
2,192,327	-				+0.7
2,192,337	-				-1.7
2,192,354	+				-0.7
2,192,375	+				+0.1
2,192,403	+				-0.3
2,192,403	+				-1.0
2,192,403	+				+0.2
2,192,411	-				+0.2
2,192,411	-				+0.5
2,192,411	-				+0.2
2,192,546	+		MIT1002_01963	0.14	+0.7
2,192,547	-		MIT1002_01963	0.14	+0.2
2,192,547	-		MIT1002_01963	0.14	-1.6
2,192,559	-		MIT1002_01963	0.15	+0.9
2,192,562	+		MIT1002_01963	0.15	-0.1
2,192,626	-		MIT1002_01963	0.21	+0.2
2,192,635	+		MIT1002_01963	0.22	+1.2
2,192,636	-		MIT1002_01963	0.22	+0.4
2,192,668	-		MIT1002_01963	0.25	-1.7
2,192,727	+		MIT1002_01963	0.31	+0.8
2,192,754	+		MIT1002_01963	0.34	+1.4
2,192,869	+		MIT1002_01963	0.45	-0.2
2,192,869	+		MIT1002_01963	0.45	-1.7
2,192,911	+		MIT1002_01963	0.49	+0.4
2,192,944	+		MIT1002_01963	0.52	+1.8
2,192,947	-		MIT1002_01963	0.52	+0.2
2,192,949	+		MIT1002_01963	0.53	+2.1
2,192,952	-		MIT1002_01963	0.53	+0.3
2,193,155	-		MIT1002_01963	0.73	+0.6
2,193,238	+		MIT1002_01963	0.81	-0.8
2,193,319	-		MIT1002_01963	0.88	+2.0
2,193,367	+				+0.9
2,193,402	+				+0.9
2,193,682	-				+0.0