Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01894

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
2,107,365	+		MIT1002_01893	0.68	+0.6
2,107,373	-		MIT1002_01893	0.68	+0.3
2,107,503	-		MIT1002_01893	0.73	-0.1
2,107,630	+		MIT1002_01893	0.78	+1.3
2,107,634	+		MIT1002_01893	0.78	+0.1
2,107,671	+		MIT1002_01893	0.79	+0.5
2,107,671	+		MIT1002_01893	0.79	+0.6
2,107,671	+		MIT1002_01893	0.79	+1.0
2,107,671	+		MIT1002_01893	0.79	+1.1
2,107,671	+		MIT1002_01893	0.79	-0.3
2,107,672	+		MIT1002_01893	0.79	-1.8
2,107,672	+		MIT1002_01893	0.79	+0.2
2,107,679	-		MIT1002_01893	0.79	-2.5
2,107,710	-		MIT1002_01893	0.81	+0.6
2,107,715	+		MIT1002_01893	0.81	+1.5
2,107,715	-		MIT1002_01893	0.81	-1.2
2,107,746	-		MIT1002_01893	0.82	+1.3
2,107,810	+		MIT1002_01893	0.84	-0.1
2,107,866	+		MIT1002_01893	0.86	+0.6
2,107,874	-		MIT1002_01893	0.87	+0.9
2,107,885	+		MIT1002_01893	0.87	+0.5
2,107,887	+		MIT1002_01893	0.87	+0.1
2,107,896	+		MIT1002_01893	0.87	-1.3
2,107,963	+		MIT1002_01893	0.90	-1.0
2,107,971	-				+0.3
2,108,031	-				-0.5
2,108,070	-				-0.9
2,108,144	-				+0.4
2,108,162	-				+0.6
2,108,331	-				+2.0
2,108,378	+				+0.2
2,108,482	+		MIT1002_01894	0.28	+0.1
2,108,490	-		MIT1002_01894	0.29	-2.7
2,108,498	-		MIT1002_01894	0.31	+0.4
2,108,504	+		MIT1002_01894	0.32	-0.4
2,108,506	+		MIT1002_01894	0.32	+0.6
2,108,568	+		MIT1002_01894	0.44	+0.8
2,108,587	+		MIT1002_01894	0.47	+4.0
2,108,607	+		MIT1002_01894	0.51	-2.7
2,108,618	+		MIT1002_01894	0.53	-1.2
2,108,642	+		MIT1002_01894	0.58	+2.4
2,108,650	-		MIT1002_01894	0.59	+0.9
2,108,686	+		MIT1002_01894	0.66	+0.4
2,108,686	+		MIT1002_01894	0.66	+0.7
2,108,694	-		MIT1002_01894	0.67	+2.0
2,108,713	-		MIT1002_01894	0.71	-1.1
2,108,764	+		MIT1002_01894	0.80	-0.9
2,108,850	+				+0.4
2,108,850	+				+0.3
2,108,850	+				-0.3
2,108,850	+				+1.9
2,109,193	+		MIT1002_01895	0.26	+0.9
2,109,327	+		MIT1002_01895	0.43	+0.3
2,109,327	+		MIT1002_01895	0.43	-0.7
2,109,335	-		MIT1002_01895	0.45	-2.0
2,109,343	-		MIT1002_01895	0.46	+0.7
2,109,440	+		MIT1002_01895	0.59	-0.2
2,109,496	+		MIT1002_01895	0.66	-0.1
2,109,553	-		MIT1002_01895	0.74	+1.0
2,109,598	+		MIT1002_01895	0.80	+0.5
2,109,656	-		MIT1002_01895	0.87	+0.7
2,109,728	-				-0.9
2,109,739	+				+0.1
2,109,757	-				-0.8
2,109,813	+				-0.5
2,109,821	-				-2.3
2,109,821	-				+2.6