Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01780

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,975,201	+		MIT1002_01778	0.64	-0.9
1,975,209	-		MIT1002_01778	0.64	+1.7
1,975,249	+		MIT1002_01778	0.67	+1.8
1,975,296	-		MIT1002_01778	0.70	-0.3
1,975,363	+		MIT1002_01778	0.74	-1.1
1,975,429	+		MIT1002_01778	0.79	-0.1
1,975,437	+		MIT1002_01778	0.79	+1.5
1,975,464	+		MIT1002_01778	0.81	-1.1
1,975,528	+		MIT1002_01778	0.85	+0.0
1,975,607	+				+0.7
1,975,610	-				-0.7
1,975,615	-				-1.5
1,975,626	+				+0.3
1,975,626	+				+0.4
1,975,626	+				+0.3
1,975,634	-				-0.4
1,975,649	-				+0.6
1,975,666	-				+1.8
1,975,691	-				-0.2
1,975,715	+				+0.0
1,975,757	+				-0.4
1,975,801	+				-0.5
1,975,809	-				-0.0
1,975,811	+				-0.9
1,975,862	+				-0.2
1,975,877	-				-0.6
1,975,877	-				-0.8
1,975,925	+				+1.1
1,975,979	+				-0.0
1,975,987	-		MIT1002_01779	0.11	+0.9
1,976,008	-		MIT1002_01779	0.24	+0.6
1,976,094	+		MIT1002_01779	0.75	+0.3
1,976,094	+		MIT1002_01779	0.75	-1.7
1,976,100	-		MIT1002_01779	0.79	-1.3
1,976,132	+				+0.9
1,976,188	+				+0.0
1,976,193	+				+1.9
1,976,196	-				+0.2
1,976,212	+				-0.0
1,976,220	-				+0.4
1,976,327	+		MIT1002_01780	0.21	+0.8
1,976,335	-		MIT1002_01780	0.22	-1.7
1,976,375	+		MIT1002_01780	0.28	+0.9
1,976,375	+		MIT1002_01780	0.28	-0.9
1,976,383	-		MIT1002_01780	0.29	+2.7
1,976,383	-		MIT1002_01780	0.29	-1.3
1,976,383	-		MIT1002_01780	0.29	-1.0
1,976,479	+		MIT1002_01780	0.43	+0.7
1,976,479	+		MIT1002_01780	0.43	+1.3
1,976,583	+		MIT1002_01780	0.59	+0.3
1,976,608	-		MIT1002_01780	0.62	+1.0
1,976,620	+		MIT1002_01780	0.64	+0.3
1,976,695	-		MIT1002_01780	0.75	-0.4
1,976,695	-		MIT1002_01780	0.75	+0.7
1,976,709	+		MIT1002_01780	0.77	-1.5
1,976,811	+				-1.1
1,976,819	-				+0.0
1,976,920	+				-0.4
1,976,920	+				+0.3
1,976,963	-				+1.3
1,976,998	+				+0.6
1,976,998	+				+0.8
1,976,998	+				+0.5
1,977,152	+				-2.1
1,977,240	-		MIT1002_01781	0.10	-1.4
1,977,358	+		MIT1002_01781	0.17	-0.2
1,977,366	-		MIT1002_01781	0.18	+1.0
1,977,424	+		MIT1002_01781	0.21	+0.1
1,977,432	-		MIT1002_01781	0.22	+0.8
1,977,432	-		MIT1002_01781	0.22	-0.2
1,977,486	-		MIT1002_01781	0.25	+0.9
1,977,486	-		MIT1002_01781	0.25	-2.8
1,977,505	+		MIT1002_01781	0.26	+1.2
1,977,521	+		MIT1002_01781	0.27	+0.4
1,977,536	+		MIT1002_01781	0.28	-1.6
1,977,536	+		MIT1002_01781	0.28	+0.6
1,977,544	-		MIT1002_01781	0.28	+1.0
1,977,544	-		MIT1002_01781	0.28	-1.2
1,977,544	-		MIT1002_01781	0.28	+1.3
1,977,544	-		MIT1002_01781	0.28	-0.7
1,977,576	+		MIT1002_01781	0.30	-0.5
1,977,612	+		MIT1002_01781	0.32	+0.2
1,977,689	+		MIT1002_01781	0.37	+0.1
1,977,707	-		MIT1002_01781	0.38	+0.8
1,977,735	+		MIT1002_01781	0.40	-0.9
1,977,812	+		MIT1002_01781	0.44	+0.9