Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01761

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,954,429	+				-0.6
1,954,454	+				+0.6
1,954,454	+				-2.0
1,954,454	+				-0.1
1,954,454	+				-1.2
1,954,512	+		MIT1002_01759	0.20	+0.0
1,954,518	+		MIT1002_01759	0.22	+1.4
1,954,520	-		MIT1002_01759	0.22	-0.7
1,954,527	+		MIT1002_01759	0.24	-2.0
1,954,572	+		MIT1002_01759	0.34	-1.7
1,954,638	+		MIT1002_01759	0.48	+0.2
1,954,765	+		MIT1002_01759	0.77	+0.5
1,954,776	+		MIT1002_01759	0.79	-0.2
1,954,865	-				-2.8
1,954,865	-				+0.2
1,954,865	-				-0.2
1,954,895	-				+0.6
1,954,901	+				+0.1
1,954,901	+				-1.2
1,954,901	+				-0.7
1,954,901	+				+1.0
1,954,906	+				+3.1
1,954,909	-				-1.3
1,954,909	-				+2.5
1,954,909	-				+0.4
1,954,909	-				+1.0
1,954,909	-				-0.5
1,954,964	+				-0.7
1,954,978	-				+0.3
1,954,980	+				+0.5
1,954,980	+				+1.0
1,954,988	-				-1.1
1,955,034	+				-1.3
1,955,075	-				+0.5
1,955,105	+				+1.1
1,955,131	-				-2.5
1,955,159	+				+0.8
1,955,171	+		MIT1002_01760	0.16	-0.7
1,955,227	-		MIT1002_01760	0.50	-0.3
1,955,256	+		MIT1002_01760	0.67	-0.4
1,955,352	-				+0.2
1,955,352	-				+0.3
1,955,359	-				-0.7
1,955,372	+				+0.3
1,955,532	+		MIT1002_01761	0.21	+0.7
1,955,532	+		MIT1002_01761	0.21	+1.2
1,955,557	+		MIT1002_01761	0.23	+0.7
1,955,599	+		MIT1002_01761	0.28	-0.4
1,955,889	+		MIT1002_01761	0.57	+0.3
1,955,889	+		MIT1002_01761	0.57	-3.6
1,955,915	+		MIT1002_01761	0.60	+2.2
1,955,934	+		MIT1002_01761	0.61	+1.9
1,956,250	+				-0.1
1,956,260	-				-1.4
1,956,310	+				+0.4
1,956,310	+				-0.5
1,956,357	+				+0.4
1,956,506	+				-0.1
1,956,637	+				+0.6
1,956,757	-				+0.3
1,956,781	-				+0.4
1,956,781	-				+0.3
1,956,783	+				-1.9
1,956,783	+				-0.2
1,956,791	-				+1.4
1,956,793	+				-0.0
1,956,798	+				-0.2
1,956,985	+				-0.1
1,957,071	-		MIT1002_01762	0.12	+0.4
1,957,152	+		MIT1002_01762	0.15	+0.6
1,957,160	-		MIT1002_01762	0.16	+3.3
1,957,160	-		MIT1002_01762	0.16	-1.3
1,957,223	-		MIT1002_01762	0.18	-0.1
1,957,233	+		MIT1002_01762	0.18	+1.6
1,957,302	+		MIT1002_01762	0.21	+0.1
1,957,309	+		MIT1002_01762	0.21	+1.3
1,957,309	+		MIT1002_01762	0.21	-1.2
1,957,309	+		MIT1002_01762	0.21	-1.1