Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01751

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,944,762	+		MIT1002_01750	0.63	+0.4
1,944,763	-		MIT1002_01750	0.63	-0.9
1,944,783	-		MIT1002_01750	0.64	-1.2
1,944,794	-		MIT1002_01750	0.65	-0.2
1,944,833	+		MIT1002_01750	0.67	-1.9
1,944,833	+		MIT1002_01750	0.67	-0.5
1,944,902	+		MIT1002_01750	0.70	-0.3
1,944,925	-		MIT1002_01750	0.71	-0.7
1,944,979	+		MIT1002_01750	0.74	-2.2
1,944,983	+		MIT1002_01750	0.74	-0.5
1,945,015	+		MIT1002_01750	0.75	-1.5
1,945,023	-		MIT1002_01750	0.76	+0.1
1,945,023	-		MIT1002_01750	0.76	-3.1
1,945,055	+		MIT1002_01750	0.77	+0.1
1,945,130	-		MIT1002_01750	0.81	-0.3
1,945,137	+		MIT1002_01750	0.81	+0.2
1,945,137	-		MIT1002_01750	0.81	-1.0
1,945,144	+		MIT1002_01750	0.81	-0.1
1,945,227	-		MIT1002_01750	0.85	-0.5
1,945,287	-		MIT1002_01750	0.88	-0.4
1,945,288	+		MIT1002_01750	0.88	+1.6
1,945,298	+		MIT1002_01750	0.89	+1.2
1,945,359	-				-0.2
1,945,380	-				+0.3
1,945,380	-				+0.1
1,945,393	+				-0.2
1,945,460	+				-0.0
1,945,465	+				-0.0
1,945,544	+				+0.8
1,945,544	+				+0.4
1,945,552	-				-0.6
1,945,636	-				-0.7
1,945,687	-				-0.1
1,945,728	+				-1.1
1,945,801	+				-1.1
1,945,825	+		MIT1002_01751	0.11	+0.4
1,945,852	+		MIT1002_01751	0.13	-1.8
1,945,867	+		MIT1002_01751	0.14	+0.2
1,945,867	+		MIT1002_01751	0.14	-1.3
1,945,867	+		MIT1002_01751	0.14	-1.2
1,945,873	+		MIT1002_01751	0.15	-2.5
1,945,875	-		MIT1002_01751	0.15	-4.1
1,945,930	-		MIT1002_01751	0.20	-1.3
1,945,970	+		MIT1002_01751	0.23	+1.0
1,946,012	+		MIT1002_01751	0.26	-0.5
1,946,025	-		MIT1002_01751	0.28	-0.4
1,946,028	+		MIT1002_01751	0.28	-0.8
1,946,028	+		MIT1002_01751	0.28	-0.2
1,946,028	+		MIT1002_01751	0.28	+1.7
1,946,044	+		MIT1002_01751	0.29	-1.1
1,946,045	+		MIT1002_01751	0.29	-0.5
1,946,102	+		MIT1002_01751	0.34	-0.7
1,946,102	+		MIT1002_01751	0.34	+0.5
1,946,110	-		MIT1002_01751	0.35	-1.9
1,946,110	-		MIT1002_01751	0.35	-0.9
1,946,110	-		MIT1002_01751	0.35	-1.9
1,946,145	+		MIT1002_01751	0.38	-1.0
1,946,153	-		MIT1002_01751	0.38	-1.9
1,946,160	+		MIT1002_01751	0.39	+1.7
1,946,175	+		MIT1002_01751	0.40	-1.0
1,946,226	-		MIT1002_01751	0.45	-1.5
1,946,267	+		MIT1002_01751	0.48	-0.6
1,946,268	+		MIT1002_01751	0.48	+3.4
1,946,287	+		MIT1002_01751	0.50	-1.8
1,946,382	-		MIT1002_01751	0.58	-0.3
1,946,420	+		MIT1002_01751	0.61	-0.0
1,946,539	-		MIT1002_01751	0.71	-1.0
1,946,541	+		MIT1002_01751	0.71	-1.1
1,946,578	+		MIT1002_01751	0.74	+0.3
1,946,578	+		MIT1002_01751	0.74	-0.0
1,946,596	-		MIT1002_01751	0.76	-1.3
1,946,633	+		MIT1002_01751	0.79	+1.8
1,946,686	+		MIT1002_01751	0.84	+1.0
1,946,776	+				-0.7
1,946,777	+				+1.2
1,946,787	+				+0.9
1,946,795	-				-3.4
1,946,941	-				-1.0
1,947,003	-				-0.5
1,947,110	+		MIT1002_01752	0.12	-1.6
1,947,111	+		MIT1002_01752	0.12	-3.7
1,947,118	-		MIT1002_01752	0.13	-1.2
1,947,176	-		MIT1002_01752	0.16	-0.8
1,947,199	+		MIT1002_01752	0.17	-0.9
1,947,257	-		MIT1002_01752	0.20	-0.3
1,947,271	+		MIT1002_01752	0.21	-1.9
1,947,271	+		MIT1002_01752	0.21	-1.3
1,947,271	+		MIT1002_01752	0.21	-1.5
1,947,271	+		MIT1002_01752	0.21	-3.2
1,947,271	+		MIT1002_01752	0.21	+0.5
1,947,271	+		MIT1002_01752	0.21	-1.9
1,947,272	+		MIT1002_01752	0.21	-1.1
1,947,279	-		MIT1002_01752	0.22	-3.2
1,947,280	-		MIT1002_01752	0.22	-1.8
1,947,285	-		MIT1002_01752	0.22	-1.4
1,947,285	-		MIT1002_01752	0.22	-1.1
1,947,290	-		MIT1002_01752	0.22	-2.2
1,947,304	+		MIT1002_01752	0.23	-2.2
1,947,304	+		MIT1002_01752	0.23	+1.1
1,947,319	-		MIT1002_01752	0.24	-1.0
1,947,356	-		MIT1002_01752	0.26	-1.2
1,947,398	+		MIT1002_01752	0.28	-0.2
1,947,398	+		MIT1002_01752	0.28	-3.0
1,947,398	+		MIT1002_01752	0.28	-0.3
1,947,406	-		MIT1002_01752	0.29	-1.9
1,947,406	-		MIT1002_01752	0.29	-3.6
1,947,523	+		MIT1002_01752	0.35	-0.8
1,947,523	+		MIT1002_01752	0.35	+0.6
1,947,531	-		MIT1002_01752	0.36	-2.1
1,947,605	-		MIT1002_01752	0.40	-3.6
1,947,619	+		MIT1002_01752	0.41	-1.0
1,947,759	+		MIT1002_01752	0.48	-3.8
1,947,759	+		MIT1002_01752	0.48	-1.8
1,947,811	-		MIT1002_01752	0.51	-1.2
1,947,816	+		MIT1002_01752	0.51	-1.2
1,947,824	-		MIT1002_01752	0.52	-0.5
1,947,863	+		MIT1002_01752	0.54	-1.3
1,947,863	+		MIT1002_01752	0.54	-0.0