Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01716

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,905,798	+		MIT1002_01714	0.79	+0.7
1,905,798	+		MIT1002_01714	0.79	-1.8
1,905,833	+		MIT1002_01714	0.82	-1.5
1,905,883	+		MIT1002_01714	0.87	+0.7
1,905,978	+				+0.5
1,905,980	+				+1.3
1,905,986	-				-0.5
1,905,987	+				+1.1
1,906,034	+				+0.3
1,906,037	+				-2.4
1,906,117	+		MIT1002_01715	0.14	+0.2
1,906,156	+		MIT1002_01715	0.20	-0.4
1,906,193	-		MIT1002_01715	0.25	-1.8
1,906,200	+		MIT1002_01715	0.26	+0.5
1,906,208	-		MIT1002_01715	0.28	+0.3
1,906,276	+		MIT1002_01715	0.38	-2.2
1,906,276	+		MIT1002_01715	0.38	+0.9
1,906,283	+		MIT1002_01715	0.39	-0.2
1,906,284	-		MIT1002_01715	0.39	+0.2
1,906,284	-		MIT1002_01715	0.39	-0.5
1,906,316	+		MIT1002_01715	0.44	+0.5
1,906,365	-		MIT1002_01715	0.51	+0.3
1,906,424	-		MIT1002_01715	0.59	+0.3
1,906,428	+		MIT1002_01715	0.60	-0.5
1,906,460	+		MIT1002_01715	0.65	+0.6
1,906,468	-		MIT1002_01715	0.66	+0.3
1,906,518	+		MIT1002_01715	0.73	+1.5
1,906,541	+		MIT1002_01715	0.77	-0.3
1,906,541	+		MIT1002_01715	0.77	-1.0
1,906,541	+		MIT1002_01715	0.77	+0.0
1,906,549	-		MIT1002_01715	0.78	+1.5
1,906,553	+		MIT1002_01715	0.78	-0.3
1,906,577	+		MIT1002_01715	0.82	+0.0
1,906,752	-				-0.7
1,906,764	-				-0.8
1,906,764	-				+0.2
1,906,769	-				-0.3
1,906,769	-				-1.0
1,906,769	-				-1.8
1,906,769	-				-0.5
1,906,919	-		MIT1002_01716	0.36	+0.8
1,906,924	+		MIT1002_01716	0.37	+1.1
1,906,962	+		MIT1002_01716	0.46	+1.4
1,907,110	-		MIT1002_01716	0.78	-0.8
1,907,200	+				-0.3
1,907,221	+				+2.2
1,907,227	-				+0.4
1,907,233	+				-0.8
1,907,236	-				+0.2
1,907,365	+				+0.0
1,907,371	+				-0.5
1,907,409	+				+1.0
1,907,409	+				-0.2
1,907,418	+				-0.1
1,907,461	+				-0.3
1,907,469	-		MIT1002_01717	0.11	+0.7
1,907,469	-		MIT1002_01717	0.11	+1.0
1,907,469	-		MIT1002_01717	0.11	+0.5
1,907,471	+		MIT1002_01717	0.11	-0.3
1,907,623	+		MIT1002_01717	0.28	-2.8
1,907,628	+		MIT1002_01717	0.28	+2.3
1,907,631	-		MIT1002_01717	0.29	-1.5
1,907,631	-		MIT1002_01717	0.29	-1.3
1,907,631	-		MIT1002_01717	0.29	+0.8
1,907,631	-		MIT1002_01717	0.29	+1.6
1,907,643	-		MIT1002_01717	0.30	-0.5
1,907,643	-		MIT1002_01717	0.30	+0.5
1,907,707	-		MIT1002_01717	0.37	-0.4
1,907,715	+		MIT1002_01717	0.38	+1.0
1,907,757	-		MIT1002_01717	0.43	-0.1
1,907,764	+		MIT1002_01717	0.44	-0.1
1,907,828	-		MIT1002_01717	0.51	-1.2
1,907,840	-		MIT1002_01717	0.52	+0.2
1,907,843	+		MIT1002_01717	0.53	-0.7
1,907,851	-		MIT1002_01717	0.53	-1.0
1,907,923	+		MIT1002_01717	0.62	+0.0
1,907,954	+		MIT1002_01717	0.65	-0.3
1,907,982	-		MIT1002_01717	0.68	-0.9
1,908,025	-		MIT1002_01717	0.73	-0.8
1,908,093	-		MIT1002_01717	0.81	+1.4
1,908,168	+		MIT1002_01717	0.89	-0.3
1,908,168	+		MIT1002_01717	0.89	-1.0
1,908,176	-		MIT1002_01717	0.90	-0.3
1,908,176	-		MIT1002_01717	0.90	+0.2
1,908,176	-		MIT1002_01717	0.90	-1.9
1,908,176	-		MIT1002_01717	0.90	+0.7
1,908,196	+				+2.6