Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01706

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,896,035	+		MIT1002_01705	0.89	-0.7
1,896,251	-				-0.8
1,896,305	+				+1.3
1,896,379	+				+0.6
1,896,397	+				-0.6
1,896,407	+				-0.1
1,896,449	-				+1.3
1,896,474	-				+0.2
1,896,524	-		MIT1002_01706	0.12	+1.1
1,896,584	-		MIT1002_01706	0.23	-0.8
1,896,584	-		MIT1002_01706	0.23	-0.3
1,896,648	-		MIT1002_01706	0.34	-1.1
1,896,648	-		MIT1002_01706	0.34	+1.5
1,896,732	+		MIT1002_01706	0.49	-1.6
1,896,740	-		MIT1002_01706	0.51	-1.3
1,896,758	+		MIT1002_01706	0.54	+1.5
1,896,758	+		MIT1002_01706	0.54	+0.6
1,896,758	+		MIT1002_01706	0.54	+0.5
1,896,787	-		MIT1002_01706	0.59	-0.3
1,896,787	-		MIT1002_01706	0.59	-0.9
1,896,904	+		MIT1002_01706	0.81	+1.5
1,896,932	+		MIT1002_01706	0.86	-0.1
1,897,040	+				-2.2
1,897,040	+				-0.1
1,897,040	+				+0.1
1,897,040	+				+3.0
1,897,040	+				-0.9
1,897,040	+				+0.3
1,897,042	+				+1.3
1,897,042	+				+0.7
1,897,048	-				+0.6
1,897,048	-				-0.3
1,897,048	-				+0.0
1,897,048	-				+0.1
1,897,048	-				-0.4
1,897,050	-				-0.1
1,897,050	-				-0.4
1,897,050	-				+0.1
1,897,050	-				+0.7
1,897,050	-				+0.6
1,897,050	-				+0.4
1,897,050	-				+1.9
1,897,272	-				+1.6
1,897,308	-				-1.7
1,897,384	+		MIT1002_01707	0.44	-2.3
1,897,389	+		MIT1002_01707	0.49	+0.5
1,897,397	-		MIT1002_01707	0.58	-1.1