Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01704

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,890,986	-		MIT1002_01703	0.67	+0.3
1,890,996	+		MIT1002_01703	0.67	+0.2
1,890,997	+		MIT1002_01703	0.67	+1.0
1,891,004	-		MIT1002_01703	0.68	+2.0
1,891,042	-		MIT1002_01703	0.69	-0.1
1,891,108	-		MIT1002_01703	0.72	-0.3
1,891,120	-		MIT1002_01703	0.73	+0.7
1,891,120	-		MIT1002_01703	0.73	-0.8
1,891,153	+		MIT1002_01703	0.74	+0.6
1,891,156	+		MIT1002_01703	0.74	-0.6
1,891,266	-		MIT1002_01703	0.79	+0.9
1,891,283	+		MIT1002_01703	0.80	+0.4
1,891,303	+		MIT1002_01703	0.81	+0.6
1,891,314	+		MIT1002_01703	0.81	-0.0
1,891,343	+		MIT1002_01703	0.83	+0.6
1,891,351	-		MIT1002_01703	0.83	-0.8
1,891,396	-		MIT1002_01703	0.85	-2.3
1,891,555	-				+1.4
1,891,647	-				+0.6
1,891,654	-				+0.3
1,891,693	+				+0.5
1,891,742	+				+1.0
1,891,742	+				-1.5
1,892,139	+		MIT1002_01704	0.16	+1.5
1,892,352	+		MIT1002_01704	0.32	-1.1
1,892,364	+		MIT1002_01704	0.32	+1.0
1,892,386	-		MIT1002_01704	0.34	+0.5
1,892,543	+		MIT1002_01704	0.46	+0.7
1,892,551	-		MIT1002_01704	0.46	-1.3
1,892,551	-		MIT1002_01704	0.46	-0.7
1,892,551	-		MIT1002_01704	0.46	+1.3
1,892,587	-		MIT1002_01704	0.49	+0.4
1,892,589	+		MIT1002_01704	0.49	+1.4
1,892,694	+		MIT1002_01704	0.57	-1.3
1,892,833	-		MIT1002_01704	0.67	-1.8
1,892,924	+		MIT1002_01704	0.74	+1.5
1,892,955	-		MIT1002_01704	0.77	+1.5
1,893,031	-		MIT1002_01704	0.82	+1.3
1,893,170	+				+0.9
1,893,227	-				-1.7
1,893,271	-				-1.3
1,893,271	-				+0.0
1,893,581	+				+0.8
1,893,581	+				+2.6
1,893,593	+				+3.9