Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01671

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,846,162	+		MIT1002_01669	0.81	-3.3
1,846,167	+		MIT1002_01669	0.81	+0.5
1,846,167	+		MIT1002_01669	0.81	-0.8
1,846,234	+		MIT1002_01669	0.87	+0.5
1,846,234	+		MIT1002_01669	0.87	-2.4
1,846,371	+				-1.5
1,846,372	+				+0.5
1,846,372	+				-2.7
1,846,385	-				-3.2
1,846,564	-		MIT1002_01670	0.44	-0.5
1,846,634	-		MIT1002_01670	0.61	+0.4
1,846,638	+		MIT1002_01670	0.62	+0.8
1,846,695	-		MIT1002_01670	0.76	-0.5
1,846,701	-		MIT1002_01670	0.78	-1.1
1,846,758	+				+1.4
1,846,817	+				-0.0
1,846,817	+				-0.2
1,846,825	+				-0.5
1,846,825	-				+0.9
1,846,825	-				+0.6
1,846,825	-				-2.5
1,846,825	-				+0.0
1,846,873	-				-0.5
1,846,879	-				-0.8
1,846,908	-				+0.2
1,846,914	+				-2.7
1,846,914	+				-1.5
1,846,942	+				-0.6
1,846,950	-				-0.3
1,847,080	+				-0.9
1,847,179	+				+1.2
1,847,259	+				-2.0
1,847,305	-		MIT1002_01671	0.14	-2.2
1,847,307	+		MIT1002_01671	0.14	-2.0
1,847,307	+		MIT1002_01671	0.14	+0.8
1,847,315	-		MIT1002_01671	0.15	-0.2
1,847,316	-		MIT1002_01671	0.15	+0.0
1,847,348	+		MIT1002_01671	0.17	+0.0
1,847,350	-		MIT1002_01671	0.18	-0.0
1,847,356	-		MIT1002_01671	0.18	+2.6
1,847,376	+		MIT1002_01671	0.20	+0.7
1,847,376	+		MIT1002_01671	0.20	-2.8
1,847,376	+		MIT1002_01671	0.20	+0.9
1,847,376	+		MIT1002_01671	0.20	-0.5
1,847,381	+		MIT1002_01671	0.20	+0.1
1,847,384	-		MIT1002_01671	0.20	-0.7
1,847,384	-		MIT1002_01671	0.20	-1.9
1,847,526	-		MIT1002_01671	0.32	+0.3
1,847,548	-		MIT1002_01671	0.34	+1.1
1,847,553	+		MIT1002_01671	0.35	+1.1
1,847,609	+		MIT1002_01671	0.40	+0.3
1,847,617	-		MIT1002_01671	0.40	-0.0
1,847,617	-		MIT1002_01671	0.40	-0.1
1,847,617	-		MIT1002_01671	0.40	+1.2
1,847,617	-		MIT1002_01671	0.40	+0.7
1,847,624	+		MIT1002_01671	0.41	+0.5
1,847,627	-		MIT1002_01671	0.41	+0.6
1,847,629	+		MIT1002_01671	0.41	-0.6
1,847,629	+		MIT1002_01671	0.41	-0.7
1,847,629	+		MIT1002_01671	0.41	-1.7
1,847,637	-		MIT1002_01671	0.42	+0.2
1,847,637	-		MIT1002_01671	0.42	-0.1
1,847,637	-		MIT1002_01671	0.42	+0.4
1,847,637	-		MIT1002_01671	0.42	+0.0
1,847,637	-		MIT1002_01671	0.42	-2.9
1,847,637	-		MIT1002_01671	0.42	-1.0
1,847,716	-		MIT1002_01671	0.49	-0.1
1,847,794	+		MIT1002_01671	0.55	+0.5
1,847,802	-		MIT1002_01671	0.56	-1.4
1,847,837	-		MIT1002_01671	0.59	-2.2
1,847,909	+		MIT1002_01671	0.65	-0.4
1,847,931	-		MIT1002_01671	0.67	+0.0
1,847,943	+		MIT1002_01671	0.68	-0.6
1,847,943	+		MIT1002_01671	0.68	+1.2
1,847,959	-		MIT1002_01671	0.69	-1.0
1,848,100	-		MIT1002_01671	0.81	+0.6
1,848,100	-		MIT1002_01671	0.81	+0.4
1,848,119	+		MIT1002_01671	0.83	+0.9
1,848,127	+		MIT1002_01671	0.84	-0.5
1,848,196	-		MIT1002_01671	0.89	+1.5
1,848,218	+				+0.1
1,848,231	+				+0.2
1,848,231	+				+0.4
1,848,239	-				+0.2
1,848,239	-				-0.2
1,848,239	-				+0.9
1,848,284	+				-1.7
1,848,291	+				-0.4
1,848,291	+				-0.3
1,848,291	+				-2.9
1,848,299	-				-0.2
1,848,313	+				-1.3
1,848,313	+				-0.8
1,848,313	+				-0.6
1,848,321	-				-0.2
1,848,420	+				+0.2
1,848,463	-				-0.4
1,848,479	-				-0.6
1,848,533	+				-0.7
1,848,541	-				+0.2
1,848,610	-		MIT1002_01672	0.15	-1.5
1,848,637	+		MIT1002_01672	0.18	+1.1
1,848,647	+		MIT1002_01672	0.18	+0.5
1,848,655	-		MIT1002_01672	0.19	+1.4
1,848,655	-		MIT1002_01672	0.19	-1.3
1,848,663	-		MIT1002_01672	0.20	-1.1
1,848,689	-		MIT1002_01672	0.22	+0.3
1,848,731	-		MIT1002_01672	0.25	-2.8
1,848,731	-		MIT1002_01672	0.25	-0.0
1,848,731	-		MIT1002_01672	0.25	-1.0
1,848,791	+		MIT1002_01672	0.30	-0.8
1,848,833	-		MIT1002_01672	0.33	+0.1
1,848,860	+		MIT1002_01672	0.36	+0.0
1,848,868	-		MIT1002_01672	0.36	-0.8
1,848,870	+		MIT1002_01672	0.37	+0.6
1,848,874	-		MIT1002_01672	0.37	+0.6
1,848,891	-		MIT1002_01672	0.38	+2.4
1,848,910	+		MIT1002_01672	0.40	-0.9
1,848,929	-		MIT1002_01672	0.41	-1.2
1,848,931	+		MIT1002_01672	0.41	-0.4
1,849,031	+		MIT1002_01672	0.50	+0.1
1,849,031	+		MIT1002_01672	0.50	-0.5
1,849,127	-		MIT1002_01672	0.57	-0.8
1,849,212	+		MIT1002_01672	0.64	+0.5
1,849,212	+		MIT1002_01672	0.64	-0.6
1,849,232	-		MIT1002_01672	0.66	-0.6
1,849,269	-		MIT1002_01672	0.69	+1.9
1,849,294	+		MIT1002_01672	0.71	-1.0
1,849,294	+		MIT1002_01672	0.71	+0.2