Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01611

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,774,299	-		MIT1002_01610	0.19	-1.5
1,774,360	+		MIT1002_01610	0.24	+0.8
1,774,400	+		MIT1002_01610	0.28	-0.2
1,774,449	+		MIT1002_01610	0.32	+0.6
1,774,457	-		MIT1002_01610	0.32	-0.5
1,774,489	-		MIT1002_01610	0.35	-0.2
1,774,569	+		MIT1002_01610	0.42	+0.3
1,774,667	+		MIT1002_01610	0.50	+0.3
1,774,675	-		MIT1002_01610	0.50	+0.7
1,774,700	+		MIT1002_01610	0.52	-0.0
1,774,713	-		MIT1002_01610	0.54	-1.2
1,774,757	-		MIT1002_01610	0.57	+1.3
1,774,892	+		MIT1002_01610	0.68	+0.7
1,774,900	+		MIT1002_01610	0.69	-0.3
1,774,930	-		MIT1002_01610	0.72	+1.1
1,774,972	-		MIT1002_01610	0.75	+0.8
1,775,002	+		MIT1002_01610	0.78	-0.3
1,775,010	-		MIT1002_01610	0.78	+0.5
1,775,029	-		MIT1002_01610	0.80	-1.6
1,775,039	-		MIT1002_01610	0.81	-1.1
1,775,070	+		MIT1002_01610	0.83	+0.9
1,775,268	-				+0.1
1,775,378	-		MIT1002_01611	0.20	+1.1
1,775,550	+		MIT1002_01611	0.51	-0.1
1,775,578	+		MIT1002_01611	0.56	+1.0
1,775,668	+		MIT1002_01611	0.73	-1.1
1,775,679	+		MIT1002_01611	0.75	+0.7
1,775,689	-		MIT1002_01611	0.77	+1.9
1,775,689	-		MIT1002_01611	0.77	-0.3
1,775,780	-				-0.9
1,775,848	+				+0.6
1,775,860	+				-0.2
1,775,938	+				+2.3
1,775,997	+				+0.9
1,776,157	+		MIT1002_01612	0.14	-2.5
1,776,165	-		MIT1002_01612	0.15	-1.1
1,776,165	-		MIT1002_01612	0.15	-0.2
1,776,197	-		MIT1002_01612	0.16	+1.9
1,776,214	+		MIT1002_01612	0.17	-1.7
1,776,217	-		MIT1002_01612	0.17	+0.3
1,776,234	+		MIT1002_01612	0.18	+0.1
1,776,244	+		MIT1002_01612	0.18	+2.6
1,776,252	-		MIT1002_01612	0.18	-0.6
1,776,334	+		MIT1002_01612	0.22	+0.5
1,776,334	+		MIT1002_01612	0.22	+0.6
1,776,342	-		MIT1002_01612	0.23	-0.0
1,776,342	-		MIT1002_01612	0.23	-0.8
1,776,424	+		MIT1002_01612	0.26	-1.3
1,776,445	+		MIT1002_01612	0.27	+0.6
1,776,447	+		MIT1002_01612	0.27	-2.1
1,776,518	+		MIT1002_01612	0.30	+0.1
1,776,526	-		MIT1002_01612	0.31	-0.2
1,776,533	+		MIT1002_01612	0.31	+0.8
1,776,637	-		MIT1002_01612	0.36	-0.1