Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01590

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,750,986	+		MIT1002_01588	0.72	+1.4
1,750,988	+		MIT1002_01588	0.72	-0.5
1,751,187	+		MIT1002_01588	0.85	-0.0
1,751,287	+				-0.1
1,751,323	+				-2.7
1,751,413	+				+0.9
1,751,413	+				+0.4
1,751,600	-		MIT1002_01589	0.50	-1.6
1,751,638	-		MIT1002_01589	0.61	+0.9
1,751,638	-		MIT1002_01589	0.61	-0.6
1,751,642	+		MIT1002_01589	0.63	-0.3
1,751,650	-		MIT1002_01589	0.65	-0.0
1,751,757	+				-0.7
1,751,803	-				+0.5
1,751,884	-				-0.3
1,752,000	-				+0.9
1,752,122	+		MIT1002_01590	0.37	+1.8
1,752,122	+		MIT1002_01590	0.37	+3.8
1,752,122	+		MIT1002_01590	0.37	-1.2
1,752,122	+		MIT1002_01590	0.37	-0.4
1,752,122	+		MIT1002_01590	0.37	-1.3
1,752,122	+		MIT1002_01590	0.37	+3.2
1,752,130	-		MIT1002_01590	0.39	+1.1
1,752,130	-		MIT1002_01590	0.39	+0.8
1,752,130	-		MIT1002_01590	0.39	+0.6
1,752,130	-		MIT1002_01590	0.39	+2.0
1,752,130	-		MIT1002_01590	0.39	+0.1
1,752,130	-		MIT1002_01590	0.39	-0.7
1,752,130	-		MIT1002_01590	0.39	-1.0
1,752,130	-		MIT1002_01590	0.39	-0.8
1,752,148	+		MIT1002_01590	0.44	-0.2
1,752,247	-		MIT1002_01590	0.71	+0.1
1,752,329	+				+0.6
1,752,390	+				+2.3
1,752,396	-				+0.3
1,752,433	+				-0.0
1,752,461	-				-0.6
1,752,463	-				-0.0
1,752,477	+				+0.0
1,752,505	-				-0.9
1,752,544	+		MIT1002_01591	0.12	+0.0
1,752,544	+		MIT1002_01591	0.12	-0.4
1,752,544	+		MIT1002_01591	0.12	-0.8
1,752,552	-		MIT1002_01591	0.13	-1.8
1,752,552	-		MIT1002_01591	0.13	-1.3
1,752,577	-		MIT1002_01591	0.15	+0.4
1,752,584	-		MIT1002_01591	0.16	-1.1
1,752,893	+		MIT1002_01591	0.40	+0.9
1,752,922	+		MIT1002_01591	0.43	-2.2
1,752,922	+		MIT1002_01591	0.43	-0.6
1,752,922	+		MIT1002_01591	0.43	-0.6
1,752,928	-		MIT1002_01591	0.43	+0.2
1,752,932	+		MIT1002_01591	0.43	+1.8
1,752,940	-		MIT1002_01591	0.44	+0.0
1,752,940	-		MIT1002_01591	0.44	-0.2
1,752,940	-		MIT1002_01591	0.44	-1.4
1,753,000	-		MIT1002_01591	0.49	-1.0
1,753,044	-		MIT1002_01591	0.52	-1.0
1,753,049	-		MIT1002_01591	0.53	-0.1
1,753,053	+		MIT1002_01591	0.53	+0.4
1,753,061	-		MIT1002_01591	0.54	-0.5
1,753,140	-		MIT1002_01591	0.60	+0.4
1,753,231	-		MIT1002_01591	0.67	+0.1
1,753,305	-		MIT1002_01591	0.73	-1.6