Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01480

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,638,528	-		MIT1002_01479	0.32	+0.4
1,638,800	-		MIT1002_01479	0.57	-0.1
1,638,906	-		MIT1002_01479	0.67	-0.2
1,639,156	-				-0.6
1,639,156	-				-1.7
1,639,156	-				-1.9
1,639,156	-				-2.0
1,639,197	-				+0.9
1,639,218	-				-1.0
1,639,256	-				-0.6
1,639,299	+				+0.4
1,639,307	-				-0.0
1,639,307	-				-1.5
1,639,308	-				-0.2
1,639,312	-				-0.9
1,639,403	+				-0.1
1,639,408	+				-1.4
1,639,408	+				+0.3
1,639,408	+				-2.2
1,639,482	-		MIT1002_01480	0.13	-1.5
1,639,513	-		MIT1002_01480	0.15	+0.5
1,639,554	+		MIT1002_01480	0.18	+1.3
1,639,573	+		MIT1002_01480	0.20	+0.7
1,639,578	+		MIT1002_01480	0.20	+1.6
1,639,578	+		MIT1002_01480	0.20	+0.0
1,639,578	+		MIT1002_01480	0.20	-0.0
1,639,578	+		MIT1002_01480	0.20	-0.1
1,639,581	-		MIT1002_01480	0.20	-1.5
1,639,586	-		MIT1002_01480	0.21	+0.9
1,639,586	-		MIT1002_01480	0.21	-0.1
1,639,618	-		MIT1002_01480	0.23	+0.3
1,639,702	+		MIT1002_01480	0.29	+0.5
1,639,710	-		MIT1002_01480	0.29	-0.5
1,639,710	-		MIT1002_01480	0.29	+2.5
1,639,714	+		MIT1002_01480	0.29	+1.6
1,639,714	+		MIT1002_01480	0.29	+0.6
1,639,901	+		MIT1002_01480	0.42	+1.1
1,639,922	+		MIT1002_01480	0.44	-1.6
1,639,930	-		MIT1002_01480	0.44	-0.2
1,639,936	+		MIT1002_01480	0.45	+0.3
1,639,940	-		MIT1002_01480	0.45	+0.7
1,640,004	-		MIT1002_01480	0.50	+1.4
1,640,005	+		MIT1002_01480	0.50	-2.8
1,640,005	+		MIT1002_01480	0.50	+0.1
1,640,005	+		MIT1002_01480	0.50	-1.0
1,640,013	-		MIT1002_01480	0.50	+0.6
1,640,039	+		MIT1002_01480	0.52	-0.0
1,640,047	-		MIT1002_01480	0.53	+1.9
1,640,065	+		MIT1002_01480	0.54	+1.0
1,640,112	+		MIT1002_01480	0.57	-0.0
1,640,140	-		MIT1002_01480	0.59	+0.6
1,640,157	+		MIT1002_01480	0.60	+0.8
1,640,165	-		MIT1002_01480	0.61	+2.7
1,640,186	+		MIT1002_01480	0.62	+0.8
1,640,194	-		MIT1002_01480	0.63	+0.8
1,640,201	+		MIT1002_01480	0.63	+0.5
1,640,201	+		MIT1002_01480	0.63	+1.5
1,640,201	+		MIT1002_01480	0.63	-0.5
1,640,209	-		MIT1002_01480	0.64	+0.7
1,640,220	+		MIT1002_01480	0.65	+0.9
1,640,227	+		MIT1002_01480	0.65	+0.8
1,640,227	+		MIT1002_01480	0.65	-0.6
1,640,227	-		MIT1002_01480	0.65	-0.4
1,640,235	-		MIT1002_01480	0.66	-0.8
1,640,256	-		MIT1002_01480	0.67	+2.1
1,640,281	+		MIT1002_01480	0.69	-0.1
1,640,281	+		MIT1002_01480	0.69	+0.2
1,640,281	+		MIT1002_01480	0.69	-0.5
1,640,281	+		MIT1002_01480	0.69	-0.6
1,640,290	-		MIT1002_01480	0.70	-1.8
1,640,399	+		MIT1002_01480	0.77	+1.5
1,640,481	-		MIT1002_01480	0.83	-0.8
1,640,505	+		MIT1002_01480	0.85	+1.3
1,640,513	-		MIT1002_01480	0.85	-1.0
1,640,513	-		MIT1002_01480	0.85	+1.8
1,640,513	-		MIT1002_01480	0.85	+0.4
1,640,513	-		MIT1002_01480	0.85	+0.3
1,640,513	-		MIT1002_01480	0.85	+0.4
1,640,551	-		MIT1002_01480	0.88	-0.6
1,640,608	+				+0.4
1,640,616	-				-0.2
1,640,633	-				-2.4
1,640,636	-				+0.8
1,640,646	-				+0.4
1,640,753	+				+0.6
1,640,768	-				-1.6
1,640,822	+				+0.2
1,640,879	-				+0.0
1,640,879	-				-0.0
1,640,947	-				+0.3
1,640,951	-				+0.8
1,640,960	+				-0.7
1,640,983	-				-0.0