Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01325

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,471,025	+		MIT1002_01324	0.30	+0.1
1,471,122	+		MIT1002_01324	0.37	-0.1
1,471,122	+		MIT1002_01324	0.37	-1.0
1,471,130	-		MIT1002_01324	0.37	-1.4
1,471,130	-		MIT1002_01324	0.37	-0.3
1,471,137	-		MIT1002_01324	0.38	-0.5
1,471,169	+		MIT1002_01324	0.40	+0.5
1,471,345	+		MIT1002_01324	0.53	+0.3
1,471,371	+		MIT1002_01324	0.54	+0.8
1,471,399	-		MIT1002_01324	0.56	+2.5
1,471,520	+		MIT1002_01324	0.65	-0.2
1,471,556	-		MIT1002_01324	0.68	+0.2
1,471,565	-		MIT1002_01324	0.68	+0.1
1,471,628	-		MIT1002_01324	0.73	-0.2
1,471,628	-		MIT1002_01324	0.73	+0.4
1,471,649	-		MIT1002_01324	0.74	-0.1
1,471,666	+		MIT1002_01324	0.76	-0.1
1,471,667	-		MIT1002_01324	0.76	-0.4
1,471,677	+		MIT1002_01324	0.76	+2.1
1,471,685	-		MIT1002_01324	0.77	-0.8
1,471,685	-		MIT1002_01324	0.77	+1.6
1,471,704	+		MIT1002_01324	0.78	+2.5
1,471,712	-		MIT1002_01324	0.79	+0.9
1,471,753	-		MIT1002_01324	0.82	+1.8
1,471,811	-		MIT1002_01324	0.86	-0.4
1,471,811	-		MIT1002_01324	0.86	-2.0
1,471,818	-		MIT1002_01324	0.86	-0.1
1,471,821	+		MIT1002_01324	0.87	+0.2
1,471,848	-		MIT1002_01324	0.89	-1.9
1,471,888	+				+1.0
1,471,888	+				+0.8
1,471,888	+				-1.7
1,471,888	+				-1.1
1,471,888	+				+1.4
1,471,888	+				+0.7
1,471,888	+				-1.3
1,471,888	+				-1.3
1,471,896	-				+0.1
1,471,896	-				+0.1
1,471,896	-				-0.3
1,471,896	-				+2.4
1,471,896	-				+0.4
1,471,896	-				-0.6
1,471,896	-				+1.1
1,471,896	-				+1.1
1,471,896	-				-0.7
1,471,896	-				-1.4
1,471,931	+				-0.8
1,471,939	-				-0.8
1,471,969	-				+0.4
1,472,035	-				-1.0
1,472,151	+		MIT1002_01325	0.24	+0.1
1,472,161	-		MIT1002_01325	0.26	+0.2
1,472,161	-		MIT1002_01325	0.26	-0.1
1,472,221	+		MIT1002_01325	0.36	+0.4
1,472,226	+		MIT1002_01325	0.37	-0.2
1,472,265	-		MIT1002_01325	0.44	+0.6
1,472,279	+		MIT1002_01325	0.46	+0.8
1,472,279	+		MIT1002_01325	0.46	+0.5
1,472,308	+		MIT1002_01325	0.51	+1.7
1,472,347	-		MIT1002_01325	0.58	+1.5
1,472,367	+		MIT1002_01325	0.61	+0.9
1,472,367	+		MIT1002_01325	0.61	+0.7
1,472,511	+		MIT1002_01325	0.86	-1.7
1,472,511	+		MIT1002_01325	0.86	+1.4
1,472,519	-		MIT1002_01325	0.87	-0.9
1,472,556	-				+1.0
1,472,580	+				-1.2
1,472,580	+				-0.0
1,472,580	+				-0.3
1,472,585	-				+0.1
1,472,588	-				-0.1
1,472,588	-				-0.2
1,472,590	-				-0.3
1,472,606	+				-0.4
1,472,621	-				-1.2
1,472,683	+				+0.1
1,472,692	-				-0.7
1,472,692	-				-1.0
1,472,692	-				+0.6
1,472,692	-				+0.5
1,472,851	+		MIT1002_01326	0.19	+0.4
1,472,859	-		MIT1002_01326	0.20	-2.3
1,472,875	+		MIT1002_01326	0.21	-3.9
1,472,875	+		MIT1002_01326	0.21	+1.4
1,472,879	+		MIT1002_01326	0.22	+0.3
1,472,879	+		MIT1002_01326	0.22	+0.9
1,472,956	+		MIT1002_01326	0.27	+0.4
1,472,957	+		MIT1002_01326	0.27	-2.6
1,472,967	+		MIT1002_01326	0.28	-0.4
1,472,967	+		MIT1002_01326	0.28	-2.4
1,472,967	+		MIT1002_01326	0.28	+0.4
1,472,967	+		MIT1002_01326	0.28	-1.3
1,472,975	-		MIT1002_01326	0.29	+0.2
1,472,975	-		MIT1002_01326	0.29	+1.4
1,472,980	-		MIT1002_01326	0.29	-0.7
1,473,001	-		MIT1002_01326	0.31	+0.4
1,473,042	-		MIT1002_01326	0.34	+1.5
1,473,061	-		MIT1002_01326	0.35	-0.2
1,473,211	-		MIT1002_01326	0.46	+1.1
1,473,230	-		MIT1002_01326	0.48	-2.3
1,473,230	-		MIT1002_01326	0.48	-1.2
1,473,242	+		MIT1002_01326	0.49	+1.1
1,473,262	+		MIT1002_01326	0.50	+0.5
1,473,267	+		MIT1002_01326	0.50	+1.9
1,473,275	-		MIT1002_01326	0.51	-1.4
1,473,289	+		MIT1002_01326	0.52	-0.3
1,473,350	+		MIT1002_01326	0.57	-0.4
1,473,350	+		MIT1002_01326	0.57	-0.2
1,473,358	-		MIT1002_01326	0.57	+0.2
1,473,358	-		MIT1002_01326	0.57	+0.4
1,473,358	-		MIT1002_01326	0.57	-0.2
1,473,358	-		MIT1002_01326	0.57	+0.7
1,473,579	+		MIT1002_01326	0.74	-0.3
1,473,581	+		MIT1002_01326	0.74	+0.1