Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01319

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,464,133	-		MIT1002_01317	0.63	+0.6
1,464,220	+		MIT1002_01317	0.74	-0.4
1,464,220	+		MIT1002_01317	0.74	-0.1
1,464,238	-		MIT1002_01317	0.76	+1.0
1,464,265	+		MIT1002_01317	0.79	+0.9
1,464,265	+		MIT1002_01317	0.79	-1.3
1,464,265	+		MIT1002_01317	0.79	-1.0
1,464,265	+		MIT1002_01317	0.79	+0.1
1,464,265	+		MIT1002_01317	0.79	-1.1
1,464,265	+		MIT1002_01317	0.79	+2.0
1,464,265	+		MIT1002_01317	0.79	-0.7
1,464,265	+		MIT1002_01317	0.79	-0.3
1,464,265	+		MIT1002_01317	0.79	-0.2
1,464,273	-		MIT1002_01317	0.80	+0.3
1,464,273	-		MIT1002_01317	0.80	-0.7
1,464,273	-		MIT1002_01317	0.80	+1.7
1,464,273	-		MIT1002_01317	0.80	+0.2
1,464,273	-		MIT1002_01317	0.80	-1.2
1,464,315	-		MIT1002_01317	0.86	-1.5
1,464,316	-		MIT1002_01317	0.86	-0.2
1,464,317	-		MIT1002_01317	0.86	-1.1
1,464,481	+				-1.2
1,464,486	+				-0.5
1,464,514	+				-0.1
1,464,540	+		MIT1002_01318	0.14	-1.4
1,464,548	-		MIT1002_01318	0.16	-1.0
1,464,557	+		MIT1002_01318	0.19	+0.0
1,464,584	+		MIT1002_01318	0.27	+1.4
1,464,592	-		MIT1002_01318	0.29	-0.3
1,464,630	-		MIT1002_01318	0.41	+0.0
1,464,659	+		MIT1002_01318	0.50	-1.2
1,464,667	-		MIT1002_01318	0.52	+0.4
1,464,667	-		MIT1002_01318	0.52	-1.4
1,464,721	+		MIT1002_01318	0.68	-3.0
1,464,746	-		MIT1002_01318	0.76	-2.1
1,464,757	+		MIT1002_01318	0.79	+1.0
1,464,782	+		MIT1002_01318	0.86	-0.3
1,464,800	-				+1.5
1,464,875	+				-1.4
1,464,923	-				+0.9
1,465,076	+		MIT1002_01319	0.25	+0.3
1,465,076	+		MIT1002_01319	0.25	+1.5
1,465,144	-		MIT1002_01319	0.48	-0.8
1,465,177	-		MIT1002_01319	0.58	+2.1
1,465,240	-		MIT1002_01319	0.79	+1.1
1,465,374	+				+0.6
1,465,382	+				+0.8
1,465,382	-				+0.1
1,465,414	-				+1.0
1,465,416	+				+0.4
1,465,417	+				-0.4
1,465,417	+				+0.1
1,465,450	-				-0.7
1,465,517	+		MIT1002_01320	0.10	-0.1
1,465,571	-		MIT1002_01320	0.13	-0.5
1,465,614	+		MIT1002_01320	0.16	-0.9
1,465,620	-		MIT1002_01320	0.16	+0.3
1,465,624	+		MIT1002_01320	0.17	-0.0
1,465,624	+		MIT1002_01320	0.17	-0.8
1,465,726	+		MIT1002_01320	0.23	+0.4
1,465,734	-		MIT1002_01320	0.23	-0.3
1,465,762	+		MIT1002_01320	0.25	-2.2
1,465,815	+		MIT1002_01320	0.28	+0.0
1,465,823	-		MIT1002_01320	0.28	+0.2
1,465,823	-		MIT1002_01320	0.28	-1.4
1,465,831	+		MIT1002_01320	0.29	-0.5
1,465,864	-		MIT1002_01320	0.31	-0.1
1,465,900	+		MIT1002_01320	0.33	-2.0
1,465,994	-		MIT1002_01320	0.39	+0.1
1,466,033	-		MIT1002_01320	0.41	+0.7
1,466,092	-		MIT1002_01320	0.44	-2.5
1,466,134	+		MIT1002_01320	0.47	+1.1
1,466,134	+		MIT1002_01320	0.47	+0.9
1,466,146	+		MIT1002_01320	0.48	-0.8
1,466,205	-		MIT1002_01320	0.51	-0.6
1,466,225	-		MIT1002_01320	0.52	-1.9