Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01308

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,454,780	-		MIT1002_01306	0.87	+0.8
1,454,825	+				-0.0
1,454,832	+				-0.1
1,454,846	+				-0.0
1,454,847	+				-0.8
1,454,847	+				-0.1
1,454,847	+				+0.5
1,454,847	+				-0.9
1,454,847	+				+0.3
1,454,855	-				+0.6
1,454,855	-				-0.3
1,454,855	-				-0.3
1,454,855	-				+0.8
1,454,855	-				+1.5
1,454,892	+				+0.6
1,454,926	-				-0.8
1,454,933	-				+0.0
1,454,959	-		MIT1002_01307	0.13	-0.7
1,455,008	+		MIT1002_01307	0.23	+0.4
1,455,044	-		MIT1002_01307	0.30	-0.3
1,455,055	+		MIT1002_01307	0.32	+0.1
1,455,072	+		MIT1002_01307	0.36	-0.3
1,455,119	+		MIT1002_01307	0.45	+1.1
1,455,126	+		MIT1002_01307	0.47	-0.8
1,455,126	+		MIT1002_01307	0.47	+1.3
1,455,127	-		MIT1002_01307	0.47	+0.2
1,455,132	-		MIT1002_01307	0.48	-0.4
1,455,141	-		MIT1002_01307	0.50	-0.5
1,455,193	+		MIT1002_01307	0.60	+0.8
1,455,201	-		MIT1002_01307	0.62	+0.3
1,455,201	-		MIT1002_01307	0.62	-1.4
1,455,201	-		MIT1002_01307	0.62	-1.9
1,455,206	+		MIT1002_01307	0.63	+0.0
1,455,206	+		MIT1002_01307	0.63	-1.1
1,455,206	+		MIT1002_01307	0.63	+0.1
1,455,214	-		MIT1002_01307	0.64	+0.2
1,455,214	-		MIT1002_01307	0.64	-0.2
1,455,214	-		MIT1002_01307	0.64	-2.5
1,455,214	-		MIT1002_01307	0.64	-0.4
1,455,477	+				+0.0
1,455,485	-				+0.2
1,455,512	+				-0.4
1,455,520	-				-0.8
1,455,576	+				+0.4
1,455,588	+				-1.7