Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01301

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,445,014	+		MIT1002_01300	0.57	-0.9
1,445,042	-		MIT1002_01300	0.59	-0.2
1,445,133	+		MIT1002_01300	0.67	+0.9
1,445,138	+		MIT1002_01300	0.67	-1.4
1,445,148	+		MIT1002_01300	0.68	+0.9
1,445,207	+		MIT1002_01300	0.73	+0.3
1,445,241	+		MIT1002_01300	0.76	-1.3
1,445,249	-		MIT1002_01300	0.76	-1.1
1,445,249	-		MIT1002_01300	0.76	-2.6
1,445,338	+		MIT1002_01300	0.84	+0.9
1,445,338	+		MIT1002_01300	0.84	-0.2
1,445,353	+		MIT1002_01300	0.85	-0.6
1,445,580	+				+1.6
1,445,580	+				+0.1
1,445,583	-				+0.3
1,445,590	+				+0.5
1,445,596	-				+0.4
1,445,598	-				-0.5
1,445,706	+				-0.1
1,445,707	+				+0.2
1,445,707	+				+2.6
1,445,707	-				+0.4
1,445,707	-				+0.9
1,445,787	+				+1.8
1,445,830	+				+0.1
1,445,847	+				+2.7
1,445,854	+				-0.2
1,445,854	+				+2.0
1,445,863	+				+1.2
1,445,984	-				+1.1
1,445,984	-				+0.5
1,446,029	-				+0.0
1,446,050	+		MIT1002_01301	0.11	+0.4
1,446,057	+		MIT1002_01301	0.13	+0.7
1,446,096	+		MIT1002_01301	0.23	-1.4
1,446,142	+		MIT1002_01301	0.35	+0.4
1,446,142	+		MIT1002_01301	0.35	+0.3
1,446,149	-		MIT1002_01301	0.36	+1.5
1,446,150	-		MIT1002_01301	0.37	+2.5
1,446,162	+		MIT1002_01301	0.40	+0.3
1,446,195	+		MIT1002_01301	0.48	-1.5
1,446,232	+		MIT1002_01301	0.58	+1.2
1,446,232	+		MIT1002_01301	0.58	+0.6
1,446,253	-		MIT1002_01301	0.63	+0.4
1,446,253	-		MIT1002_01301	0.63	+1.2
1,446,259	-		MIT1002_01301	0.64	-0.3
1,446,276	-		MIT1002_01301	0.69	+0.4
1,446,518	+				-0.8
1,446,518	+				+0.9
1,446,518	+				-1.7
1,446,520	+				-2.6
1,446,538	+				-0.0
1,446,538	+				+0.2
1,446,538	+				+1.6
1,446,546	-				+1.1
1,446,557	-				+1.1
1,446,559	+		MIT1002_01302	0.10	+0.0
1,446,565	-		MIT1002_01302	0.11	-2.1
1,446,612	-		MIT1002_01302	0.14	-0.9
1,446,628	+		MIT1002_01302	0.16	+0.0
1,446,674	+		MIT1002_01302	0.19	-0.8
1,446,674	+		MIT1002_01302	0.19	-0.4
1,446,674	+		MIT1002_01302	0.19	+0.3
1,446,687	-		MIT1002_01302	0.20	-1.5
1,446,754	+		MIT1002_01302	0.26	+1.1
1,446,762	-		MIT1002_01302	0.26	+1.7
1,446,777	+		MIT1002_01302	0.27	-0.2
1,446,777	+		MIT1002_01302	0.27	+0.7
1,446,824	+		MIT1002_01302	0.31	-0.2
1,446,832	-		MIT1002_01302	0.32	+0.1
1,446,934	-		MIT1002_01302	0.40	-0.8
1,446,934	-		MIT1002_01302	0.40	+0.1
1,446,982	-		MIT1002_01302	0.44	-1.2
1,447,038	+		MIT1002_01302	0.48	+0.2
1,447,088	+		MIT1002_01302	0.52	+0.3
1,447,142	+		MIT1002_01302	0.56	-0.5
1,447,142	+		MIT1002_01302	0.56	-1.0
1,447,205	-		MIT1002_01302	0.61	+0.3
1,447,225	+		MIT1002_01302	0.63	+0.6
1,447,274	-		MIT1002_01302	0.67	+0.3
1,447,285	+		MIT1002_01302	0.68	-0.1
1,447,341	-		MIT1002_01302	0.72	-0.2