Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01262

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,389,098	+		MIT1002_01261	0.66	-0.4
1,389,138	-		MIT1002_01261	0.68	+0.8
1,389,138	-		MIT1002_01261	0.68	+0.7
1,389,182	+		MIT1002_01261	0.70	-0.3
1,389,226	-		MIT1002_01261	0.72	+0.1
1,389,278	+		MIT1002_01261	0.75	-0.2
1,389,278	+		MIT1002_01261	0.75	-0.9
1,389,278	+		MIT1002_01261	0.75	-0.6
1,389,286	-		MIT1002_01261	0.75	+0.7
1,389,286	-		MIT1002_01261	0.75	+0.2
1,389,286	-		MIT1002_01261	0.75	+0.0
1,389,286	-		MIT1002_01261	0.75	+0.2
1,389,286	-		MIT1002_01261	0.75	+0.2
1,389,306	-		MIT1002_01261	0.76	-1.1
1,389,306	-		MIT1002_01261	0.76	-1.9
1,389,306	-		MIT1002_01261	0.76	-0.9
1,389,306	-		MIT1002_01261	0.76	-0.7
1,389,476	-		MIT1002_01261	0.84	-0.7
1,389,521	+		MIT1002_01261	0.87	-0.8
1,389,559	+		MIT1002_01261	0.89	+1.2
1,389,614	+				+0.3
1,389,721	-				-0.5
1,389,775	-				+0.8
1,389,826	-				-0.1
1,389,828	-				+0.4
1,389,828	-				-0.2
1,390,018	-				+1.7
1,390,052	-				+1.6
1,390,073	+				+0.0
1,390,115	-				+1.0
1,390,115	-				-0.1
1,390,117	+				+0.3
1,390,125	-				+0.7
1,390,125	-				-0.6
1,390,125	-				-2.3
1,390,131	+				+0.7
1,390,244	+		MIT1002_01262	0.20	+0.1
1,390,347	+		MIT1002_01262	0.31	+0.4
1,390,355	-		MIT1002_01262	0.31	-0.4
1,390,362	-		MIT1002_01262	0.32	+0.4
1,390,364	+		MIT1002_01262	0.32	+0.7
1,390,512	+		MIT1002_01262	0.48	-0.0
1,390,515	-		MIT1002_01262	0.49	+1.5
1,390,520	-		MIT1002_01262	0.49	+2.1
1,390,525	+		MIT1002_01262	0.50	+0.4
1,390,550	-		MIT1002_01262	0.53	-0.3
1,390,847	+		MIT1002_01262	0.85	-1.5
1,390,929	-				+0.7
1,390,933	+				+0.3
1,390,940	-				+0.4
1,390,962	-				-0.1
1,391,056	-				+0.5
1,391,397	+		MIT1002_01263	0.47	-2.8
1,391,397	+		MIT1002_01263	0.47	-4.4
1,391,397	+		MIT1002_01263	0.47	-5.9
1,391,466	+		MIT1002_01263	0.58	-5.6
1,391,486	-		MIT1002_01263	0.61	-0.1
1,391,523	-		MIT1002_01263	0.67	-0.6
1,391,528	-		MIT1002_01263	0.67	-4.0
1,391,652	-		MIT1002_01263	0.86	-0.9
1,391,691	-				-3.6
1,391,691	-				-3.3
1,391,699	-				-2.5
1,391,701	+				-1.7
1,391,709	-				-2.6
1,391,719	+				-1.6
1,391,812	-				+0.9
1,391,864	+				-2.5
1,391,864	+				-2.0
1,391,879	+				-1.4
1,391,879	+				-2.7
1,391,887	-				-2.9
1,391,887	-				-0.9
1,391,904	-				-3.7
1,391,918	-		MIT1002_01264	0.12	-2.0
1,391,927	+		MIT1002_01264	0.13	-4.7
1,391,934	+		MIT1002_01264	0.14	-1.5
1,391,935	-		MIT1002_01264	0.14	-3.8
1,391,942	-		MIT1002_01264	0.15	-2.4
1,391,953	-		MIT1002_01264	0.17	-2.5
1,391,959	-		MIT1002_01264	0.18	-0.9