Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01260

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,385,737	+				-0.1
1,385,774	+				-0.2
1,385,782	+				+1.3
1,385,782	-				+1.2
1,385,792	-				-0.5
1,386,191	+				-0.2
1,386,191	+				+1.0
1,386,199	-				-0.8
1,386,234	-				+1.2
1,386,234	-				+1.4
1,386,234	-				+0.1
1,386,243	+				-0.4
1,386,287	+				-2.7
1,386,323	+				+1.3
1,386,371	-				-2.4
1,386,373	+				+0.6
1,386,407	+				-0.8
1,386,407	+				+0.2
1,386,415	-				-1.6
1,386,415	-				+0.4
1,386,502	+		MIT1002_01260	0.15	-0.3
1,386,523	+		MIT1002_01260	0.16	+1.1
1,386,599	+		MIT1002_01260	0.22	-0.8
1,386,607	-		MIT1002_01260	0.23	+1.1
1,386,607	-		MIT1002_01260	0.23	+1.1
1,386,664	+		MIT1002_01260	0.27	-0.6
1,386,664	+		MIT1002_01260	0.27	-0.6
1,386,692	+		MIT1002_01260	0.29	+2.3
1,386,700	-		MIT1002_01260	0.29	+0.7
1,386,702	+		MIT1002_01260	0.29	+2.6
1,386,715	-		MIT1002_01260	0.30	+0.9
1,386,721	+		MIT1002_01260	0.31	+0.4
1,386,809	+		MIT1002_01260	0.37	+0.5
1,386,887	-		MIT1002_01260	0.43	-1.5
1,386,925	-		MIT1002_01260	0.46	+0.0
1,387,078	+		MIT1002_01260	0.57	+0.1
1,387,122	-		MIT1002_01260	0.60	+1.9
1,387,206	+		MIT1002_01260	0.66	+0.5
1,387,384	-		MIT1002_01260	0.79	+0.9
1,387,410	+		MIT1002_01260	0.81	+0.7
1,387,410	+		MIT1002_01260	0.81	-1.3
1,387,410	+		MIT1002_01260	0.81	+0.6
1,387,410	+		MIT1002_01260	0.81	+0.9
1,387,420	-		MIT1002_01260	0.81	+0.9
1,387,435	+		MIT1002_01260	0.82	+0.9
1,387,440	+		MIT1002_01260	0.83	+1.8
1,387,440	+		MIT1002_01260	0.83	+0.5
1,387,529	+		MIT1002_01260	0.89	+1.1
1,387,669	-				+1.4
1,387,691	+				-0.0
1,387,691	+				-0.6
1,387,691	+				+0.2
1,387,691	+				+0.4
1,387,691	+				-3.5
1,387,691	+				-0.2
1,387,691	+				-0.9
1,387,691	+				-0.9
1,387,699	-				-0.5
1,387,699	-				+1.2
1,387,699	-				+0.9
1,387,699	-				+0.6
1,387,699	-				+0.1
1,387,699	-				+0.1
1,387,699	-				-0.1
1,387,699	-				-0.4
1,387,739	+				+0.6
1,387,792	-				+0.8
1,387,874	+				-0.8
1,387,874	+				-0.9
1,387,874	+				-1.8
1,387,889	+				-0.1
1,387,897	-				-0.8
1,387,897	-				-1.0
1,387,902	+				+0.1
1,387,909	+				-1.0
1,387,920	+				+0.4
1,387,920	+				-3.0
1,387,928	-				-1.3
1,387,936	+				-1.6
1,387,997	-		MIT1002_01261	0.11	-1.1
1,388,027	+		MIT1002_01261	0.13	+0.3
1,388,027	+		MIT1002_01261	0.13	-0.7
1,388,101	-		MIT1002_01261	0.16	+0.9
1,388,177	-		MIT1002_01261	0.20	+0.7
1,388,213	+		MIT1002_01261	0.22	+2.3
1,388,232	-		MIT1002_01261	0.23	+1.0
1,388,269	+		MIT1002_01261	0.25	-0.4
1,388,270	+		MIT1002_01261	0.25	+0.1
1,388,270	-		MIT1002_01261	0.25	-0.9
1,388,270	-		MIT1002_01261	0.25	+0.1
1,388,278	-		MIT1002_01261	0.25	-1.1
1,388,278	-		MIT1002_01261	0.25	-0.5
1,388,278	-		MIT1002_01261	0.25	+2.4
1,388,313	+		MIT1002_01261	0.27	-0.8
1,388,321	-		MIT1002_01261	0.27	-1.4
1,388,334	-		MIT1002_01261	0.28	-0.2
1,388,401	-		MIT1002_01261	0.31	-2.1
1,388,401	-		MIT1002_01261	0.31	-1.9
1,388,413	-		MIT1002_01261	0.32	-0.1
1,388,475	+		MIT1002_01261	0.35	+0.2
1,388,481	-		MIT1002_01261	0.35	-0.4
1,388,481	-		MIT1002_01261	0.35	-0.8
1,388,517	+		MIT1002_01261	0.37	-0.1
1,388,519	+		MIT1002_01261	0.37	+0.4
1,388,519	+		MIT1002_01261	0.37	-0.1
1,388,519	+		MIT1002_01261	0.37	-0.1
1,388,519	+		MIT1002_01261	0.37	-1.7
1,388,527	-		MIT1002_01261	0.37	+0.7
1,388,527	-		MIT1002_01261	0.37	+0.3
1,388,527	-		MIT1002_01261	0.37	-1.0
1,388,527	-		MIT1002_01261	0.37	-0.5
1,388,549	+		MIT1002_01261	0.38	+0.6
1,388,559	-		MIT1002_01261	0.39	-0.9
1,388,627	+		MIT1002_01261	0.42	-2.0
1,388,633	-		MIT1002_01261	0.43	-0.6