Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01244

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 5
1,371,088	+				-0.2
1,371,196	-				+0.9
1,371,207	-				-0.5
1,371,224	+		MIT1002_01243	0.11	+2.8
1,371,232	-		MIT1002_01243	0.12	+1.8
1,371,325	-		MIT1002_01243	0.22	+0.1
1,371,388	+		MIT1002_01243	0.30	-1.6
1,371,392	+		MIT1002_01243	0.30	+0.9
1,371,400	-		MIT1002_01243	0.31	-0.2
1,371,401	+		MIT1002_01243	0.31	+2.7
1,371,410	-		MIT1002_01243	0.32	+0.5
1,371,447	-		MIT1002_01243	0.36	-0.9
1,371,462	+		MIT1002_01243	0.38	+1.0
1,371,468	-		MIT1002_01243	0.39	+0.5
1,371,470	-		MIT1002_01243	0.39	+0.3
1,371,494	+		MIT1002_01243	0.42	+0.5
1,371,498	-		MIT1002_01243	0.42	+0.9
1,371,537	+		MIT1002_01243	0.47	+1.0
1,371,550	+		MIT1002_01243	0.48	+0.1
1,371,674	+		MIT1002_01243	0.62	+0.7
1,371,676	+		MIT1002_01243	0.63	-0.3
1,371,676	+		MIT1002_01243	0.63	-0.2
1,371,698	+		MIT1002_01243	0.65	-1.9
1,371,698	+		MIT1002_01243	0.65	-0.2
1,371,698	+		MIT1002_01243	0.65	-0.7
1,371,698	+		MIT1002_01243	0.65	+0.7
1,371,698	+		MIT1002_01243	0.65	-1.5
1,371,698	+		MIT1002_01243	0.65	+0.2
1,371,698	+		MIT1002_01243	0.65	+0.3
1,371,698	+		MIT1002_01243	0.65	-0.7
1,371,706	-		MIT1002_01243	0.66	-0.1
1,371,706	-		MIT1002_01243	0.66	-1.3
1,371,706	-		MIT1002_01243	0.66	+1.3
1,371,754	+		MIT1002_01243	0.71	+0.9
1,371,783	+		MIT1002_01243	0.75	-0.2
1,371,790	+		MIT1002_01243	0.76	-0.5
1,371,797	-		MIT1002_01243	0.76	-1.0
1,371,910	+		MIT1002_01243	0.89	-0.7
1,371,969	-				-0.1
1,372,061	+				+0.1
1,372,061	+				-0.3
1,372,069	-				+1.2
1,372,069	-				-0.4
1,372,069	-				-2.4
1,372,096	+				-0.4
1,372,113	-				+0.2
1,372,115	+				+0.5
1,372,135	+				+0.8
1,372,143	-				+0.9
1,372,150	-				+0.6
1,372,176	+		MIT1002_01244	0.11	-0.2
1,372,176	+		MIT1002_01244	0.11	+2.9
1,372,176	+		MIT1002_01244	0.11	-0.0
1,372,176	+		MIT1002_01244	0.11	-0.0
1,372,176	+		MIT1002_01244	0.11	-0.1
1,372,184	-		MIT1002_01244	0.12	+1.0
1,372,184	-		MIT1002_01244	0.12	-0.0
1,372,184	-		MIT1002_01244	0.12	+1.5
1,372,184	-		MIT1002_01244	0.12	+0.0
1,372,184	-		MIT1002_01244	0.12	-1.4
1,372,208	+		MIT1002_01244	0.14	+0.4
1,372,316	+		MIT1002_01244	0.23	+0.8
1,372,332	-		MIT1002_01244	0.24	-0.2
1,372,343	+		MIT1002_01244	0.25	+1.0
1,372,343	+		MIT1002_01244	0.25	-0.3
1,372,351	-		MIT1002_01244	0.26	+1.2
1,372,351	-		MIT1002_01244	0.26	+0.0
1,372,415	+		MIT1002_01244	0.31	+1.1
1,372,417	-		MIT1002_01244	0.31	+0.6
1,372,559	-		MIT1002_01244	0.43	+1.1
1,372,621	-		MIT1002_01244	0.49	+2.9
1,372,709	-		MIT1002_01244	0.56	+1.7
1,372,709	-		MIT1002_01244	0.56	-1.2
1,372,928	+		MIT1002_01244	0.74	-2.5
1,372,971	-		MIT1002_01244	0.78	-1.8
1,373,015	-		MIT1002_01244	0.81	+1.7
1,373,145	-				+2.6
1,373,147	-				-1.5
1,373,154	+				+0.7
1,373,154	+				-0.7
1,373,162	-				+0.2
1,373,168	+				-0.4
1,373,240	+				+0.6
1,373,240	+				-0.8
1,373,240	+				-1.3
1,373,248	-				+0.1
1,373,411	+		MIT1002_01245	0.11	-0.1
1,373,411	+		MIT1002_01245	0.11	-1.0
1,373,448	-		MIT1002_01245	0.20	-0.2
1,373,458	-		MIT1002_01245	0.22	-0.0
1,373,482	-		MIT1002_01245	0.29	+0.1
1,373,547	+		MIT1002_01245	0.45	-0.7
1,373,553	+		MIT1002_01245	0.46	+0.9
1,373,561	-		MIT1002_01245	0.48	+1.2
1,373,561	-		MIT1002_01245	0.48	-1.7
1,373,561	-		MIT1002_01245	0.48	-2.8
1,373,596	+		MIT1002_01245	0.57	-0.1
1,373,604	-		MIT1002_01245	0.59	-2.3
1,373,649	+		MIT1002_01245	0.71	+0.1
1,373,703	+		MIT1002_01245	0.84	+0.3
1,373,703	+		MIT1002_01245	0.84	-3.0
1,373,703	+		MIT1002_01245	0.84	-1.4
1,373,869	-				-1.6
1,373,900	-				+0.4
1,373,920	+				+0.1
1,373,930	+				-1.2
1,373,930	+				+0.4
1,373,933	+				-1.2
1,373,938	-				+0.6
1,374,027	+				+0.8
1,374,171	+		MIT1002_01246	0.20	+0.5
1,374,171	+		MIT1002_01246	0.20	+1.8
1,374,171	+		MIT1002_01246	0.20	-0.1
1,374,200	+		MIT1002_01246	0.24	+0.0